Hi Anastasia,
The file I have seems very similar to the file in that link. I've pasted my
file below:
# Title Pathway Statistics
#
# generating_program /usr/local/freesurfer/bin/dmri_pathstats
# cvs_version
# cmdline /usr/local/freesurfer/bin/dmri_pathstats --intrc
/usr/local/freesurfer/subjects/
Hi Anastasia,
This was the full command:
tractstats2table --inputs
/usr/local/freesurfer/subjects/control_data/diffusion_tracs/Control200/dpath/lh.slft_PP_avg33_mni_flt/pathstats.overall.txt
--overall --tablefile
/usr/local/freesurfer/subjects/control_data/diffusion_tracs/Control200/dpath/lh.slft
Hi there,
I generated tractographies using the TRACULA pipeline and I'm not trying to
generate the necessary statistics for them using tractstats2table. This is
the command I'm using:
tractstats2table --inputs /usr/local/freesurfer/subjects/control_data/
diffusion_tracs/Control200/dpath/lh.slft_P
Hi Anastasia,
Thanks a lot for willing to help me out, but I'd really appreciate if you
may please let me know what the next steps might be since I'm getting the
same error for tractsstats2table.
Regards,
Adarsh
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Hi Anastasia,
I had tried "inputs" when running the command but had a typo when pasting
it in this forum. I tried again just to make sure and it didn't work.
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Hi Anastasia,
Thanks a lot for your response. I tried tractstats2table with and without
the space between "--" and "input" and it still didn't work.
Regards,
Adarsh
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Hi there,
I generated tractographies using the TRACULA pipeline and I'm not trying to
generate the necessary statistics for them using tractstats2table. This is
the command I'm using:
tractstats2table -- input
/usr/local/freesurfer/subjects/control_data/diffusion_tracs/Control200/dpath/lh.slft_PP
