> 3dvolreg. As for analysis, you should be able run
>
> mri_concat --paired-diff --mean inputaslvolume outputvolume
>
> I've never actually tried it like this, but it should work.
>
> doug
>
>
> On Mon, 27 Nov 2006, Abi Gopal wrote:
>
>> Hi all
>>
>>
Hi all
I have collected some raw Arterial Spin Labeling (ASL) data. I would like
to use freesurfer to create perfusion maps of this data. Is it possible to
take the raw data, motion correct it, perform a pairwise subtraction, and
then average all the subtractions to create a mean perfusion map?
Hello all
I'm new to the freesurfer mailing list, so I was hoping I could get some
advice here. As part of my research, I have been acquiring arterial
spin-labeling (ASL) images of subjects with cortical dysplasia (a type of
brain malformation). However, I've been having problems visualizing th
are of the remaining steps and created these files.
ThanksabiOn 11/14/06, Bruce Fischl <[EMAIL PROTECTED]> wrote:
but how did you reun recon-all and what did it output?On Tue, 14 Nov 2006,Abi Gopal wrote:> Hi all, below is my information.>> rhinal>> cat $FREESURFER_HOME/build-stamp.txt
l info and what is not. To assist
you, we have prepared the following web site:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting. Please look over that
and supply all the information is asks for.
thanks!
doug
Abi Gopal wrote:
Hello all
Hello all
I am trying to view my outputted images from reco
Hello allHello allI am trying to view my outputted images from reconstruction in tksurfer. However, there are no files in the 'surf' folder in my subject. The 'mri' folder only has the orig.mgz file. How do I get the other files, such as .wm, .filled, etc, that result from the 'tesselating' and
Hello allI have a basic question. How do I create
cortical thickness maps? I have been through most of the
freesurfer tutorial and understand most of the commands.
However, I am wondering how I can create a cortical thickness map for
some of my own MRI data. Please let me know what steps I sho
