quot;freesurfer@nmr.mgh.harvard.edu"
Subject: Re: [Freesurfer] Autorecon1 failure
No, we have not talked
On 4/16/2021 12:20 PM, Abdollahi, Shervin (NIH/NINDS) [C] wrote:
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So yes running it from scratch would work. But I was trying to implement
fmriprep approac
cratch (recon-all -s subject -all), does it work? If you
are going to pick and chose which options to apply, then there is a high risk
of missing steps
On 4/14/2021 2:23 PM, Abdollahi, Shervin (NIH/NINDS) [C] wrote:
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Hi Douglas, Sure, here is the copy of recon-all
failure
Sorry, can you resend the recon-all.log file?
On 4/7/2021 8:45 AM, Abdollahi, Shervin (NIH/NINDS) [C] wrote:
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From: "Abdollahi, Shervin (NIH/NINDS) [C]"
<mailto:shervin.abdoll...@nih.gov>
Date: Thursday, March 18, 2021 at 12:42 PM
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From: "Abdollahi, Shervin (NIH/NINDS) [C]"
Date: Thursday, March 18, 2021 at 12:42 PM
To: "freesurfer@nmr.mgh.harvard.edu"
Subject: Autorecon1 failure
Hello Freesurfer Developers,
am trying to use run freesurfer that
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Hello Freesurfer Developers,
am trying to use run freesurfer that is configured inside
smriprep.workflow.anatomical.py under init_anat_preproc_wf pipeline. this
workflow, does the following:
1. T1w reference: realigning and then averaging T1w im
