[Freesurfer] Getting stats from stats files. rh.w-g.pct. asegstatsdiff

2019-10-22 Thread Троицкий Антон Александрович
External Email - Use Caution Dear free surfer developers, 1. I processed several items of data. And I have rh.w-g.pct file in my stats folders. How can I get process this file to get table reading file? I tried to use asegstats2table and aparcstats2table but it didn’t work

[Freesurfer] FreeSurfer freezing during processing.

2019-10-03 Thread Троицкий Антон Александрович
External Email - Use Caution Hello FreeSurfer Developers, I have installed the FreeSurfer how described here https://surfer.nmr.mgh.harvard.edu/fswiki/WindowsSupport. I launch an Ubuntu terminal and stat a freesurfer application from an Ubuntu command line. [cid:4348455d-9967-4

Re: [Freesurfer] Interruption during data processing

2019-09-06 Thread Троицкий Антон Александрович
External Email - Use Caution Bruce, could you explain how can I do that? I mean what command should I use and parameters? Best regards, Anton Troitskii ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.har

[Freesurfer] Interruption during data processing

2019-09-05 Thread Троицкий Антон Александрович
External Email - Use Caution Dear freesurfer users, I encountered a problem when data processing suddenly interrupted. Is there any way to continue procession of patient data and don't repeat previous steps and don't waste the time? Best regards, Anton Troitskii. ___

[Freesurfer] An error during data processing

2019-08-20 Thread Троицкий Антон Александрович
External Email - Use Caution Hello FreeSurfer Developers, I a beginner freesurfer user. It is my first patient that I try to process. The patient data was obtained on Philips MRI Achieva 3.0 T with dStream application. I performed /Applications/freesurfer/bin/recon-all -i /Us