[Freesurfer] TRACULA multiple sessions output question

2024-06-10 Thread Fotiadis, Panagiotis
External Email - Use Caution Hello, First of all, thank you for the fantastic software! I have a cohort of individuals with multiple DWI sessions each, and I have been using TRACULA with a configuration file similar to that of Example 3 (“Cross-sectional study, multiple diffusi

[Freesurfer] Cannot find mri/transforms/talairach.m3z file

2024-06-10 Thread Dan Levitas
External Email - Use Caution Hello, I am following the longitudinal freesurfer pipeline ( https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/LongitudinalTutorial) and getting this error on the final (LONG) portion: *ERROR: cannot find or read transforms/talairach.m3z* I can c