Re: [Freesurfer] lta_convert issue with ants Registration Matrix

External Email - Use Caution Hi Yazdan, Thank you for the detailed explanation. I’m wondering if you could send output of mri_info for Image.nii, fsl_resampled.nii.gz, fslregistered.nii.gz, freesurfer.nii, and output from ANTs. Best, Yujing From: freesurfer-boun...@nmr.mgh.h

Re: [Freesurfer] Free surfer quits unexpectedly

External Email - Use Caution Thanks for this, R! Monika (cc'd) is running into the same issue, and has followed these steps, and can now open files from the command line, but not from the GUI. Any ideas? -Paul From: freesurfer-boun...@n

[Freesurfer] registration of a rescaled volume

External Email - Use Caution Hi there, I have an animal brain's MRI with 3 volumes, each with a good resolution in one of the planes. (i. 768x768x88, ii. 768x768x150, iii. 768x768x140) As far as I understand freeSurfere doesn't have a 3D ihgh-res reconstruction tool, right? S