[Freesurfer] mri_glmfit

External Email - Use Caution Dear FS experts, I am working on a surface based analysis using FS 7.1.1 and I would like to run mri_glmfit between two groups using the flag "--label" to restrict analysis within lobes. I ran these commands on fsaverage mri_annotation2label --subject

[Freesurfer] What’s your dream scanner, coil, peripherals combo?

External Email - Use Caution Greetings, A Dean of Research is seeking input for a new research dedicated neuroimaging suite and asked me about about potential items. While I’m familiar with the setups I’ve used, I’m wondering what others would recommend if they could start from

[Freesurfer] Two basic questions: brainmask file versions and qcache

External Email - Use Caution Dear FreeSurfer experts, I hope this email finds you all well. I have two relatively basic questions that I am hoping to get some help with. My basic planned processing pipeline is: Run initial recon-all with gcut and ws flags Edit white matter