Re: [Freesurfer] High Resolution Freesurfer Error

2022-12-13 Thread Glasser, Matt
External Email - Use Caution How about a picture of the problem? At least at one time, some of FreeSurfer was limited to 256^3 voxels and there is a maximum resolution that you can fit a human brain in with that. Matt. From: on behalf of Brooklyn Wright Reply-To: Freesurfer

[Freesurfer] High Resolution Freesurfer Error

2022-12-13 Thread Brooklyn Wright
External Email - Use Caution Hi there 🙂 I am running into repeat difficulty with reconstructing ultra-high resolution T1w .nii images (0.25mm^3 voxel size). These have been submitted to rigorous preprocessing steps and I use hires flags and expert preferences however all of my

[Freesurfer] Archive Passcode Request

2022-12-13 Thread Em Rose Triolo
External Email - Use Caution Hello, I am installing FreeSurfer on a Windows machine using VirtualBox. I need a passcode to unzip the .ova file. I am emailing to request this passcode. I already have a license txt file, but I am assuming this is something different. Thank you, Em

Re: [Freesurfer] lh.pial lh.pialT1n same file?

2022-12-13 Thread Huang, Yujing
Hi Rene, Do you mean lh.pial.T1? Do you have any other lh.pial* files in the directory? What is your recon-all command line? And can you also provide the Freesurfer version you are running? Best, Yujing -Original Message- From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Ren

[Freesurfer] lh.pial lh.pialT1n same file?

2022-12-13 Thread Renew Andrade
External Email - Use Caution Dear experts: I am wondering if lh.pial and lh.pialT1 are the same files. I don’t have lh.pial is that an error from recon-all? Should I rerun recon-all. Or just autorecon-pial? Would that change anything? Best, Rene Andrade.