[Freesurfer] How to set original orientation to be sagittal view?

External Email - Use Caution Hello Freesurfer Experts, How can we set the original orientation of an image file such that when the image is opened in a different application the original orientation is a sagittal viewport? For the file aseg.mgz in the below directory based on yo

Re: [Freesurfer] [External] FS 7.2 Ubuntu pass required

External Email - Use Caution May I have the password? From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Tabasi, Farhad Sent: Friday, November 18, 2022 1:47 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [External] [Freesurfer] FS 7.2 Ubuntu pass required Extern

[Freesurfer] FS 7.2 Ubuntu pass required

External Email - Use Caution Hello, I am installing the Virtual Machine to run Freesurfer, and I prompted with a password. Could you please share the password with me? Thank you for your help. Regards, Farhad Tabasi ___ Freesurfer ma

[Freesurfer] Passcode request

External Email - Use Caution Dear Sir or Madam, I would like to request the passcode for the FS_7_2_0_ubuntu_18_04_06.ova.7z file. I can`t open it without one. Thank you very much for your help. Yours sincerely, Emma Wiedenmann _

Re: [Freesurfer] Supplying a mask to recon-all?

Try running it with -xmask yourmask.mgz On 11/17/2022 10:31 AM, Xinyu Liu wrote: External Email - Use Caution Dear experts, I am trying to use freesurfer with a set of high-resolution images (0.6mm3 isotropic) and I found the brain mask generated by freesurfer is not ideal. In this