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You shouldn’t be getting errors about libcuda (which we do not support).
If you have not already done so, please try the script we provide to install
the Matlab runtime environment,
$ cd $FREESURFER_HOME/bin$ sudo FREESURFER_HOME=$FREESURFER_HOME
./f
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Hi Eugenio -
Thanks for your reply. We have a Linux Tech. He installed it for me. Should
I reinstall the runtime ?
Thanks,
Alan
On Tue, Oct 18, 2022 at 2:59 PM Iglesias Gonzalez, Juan E. <
jiglesiasgonza...@mgh.harvard.edu> wrote:
> Dear Alan,
> Ho
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Hello Nárlon,
The caveat we post on the web page for the current 7.X releases
at https://secure-web.cisco.com/1SH9723fOHUEJDTPhOh9cxPtQV83D227ju0p39ar6g5zJrD2Sqk7zA2LQNpyc4KWogUlcLciUwwHtaF2JmIY7WpESx9m3iINV7dHcNv_rhBgu2VRKIwGKQlpynZjNmGjjj9UAjxSnhmlCD
Hi Padma,
The error is saying it can't find the file /mri/norm.mgz. Does that file exist?
What does `ls /mri/norm.mgz` return?
-Paul
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of priya padma
Sent: Wednesday, October 19, 2022 2:07 AM
To: Freesurf
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Dear FreeSurfer team:
I just wanted to confirm the potential issues of upgrading the OS. We are
running FreeSurfer 7.1.1 on MacOS 10.4.6 and wanted to upgrade to MacOS 10.15.
Our data have been analyzed cross-sectionally and we’ll soon run longitudin
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After replacing mri_sclimbic_seg with the patch notes, I get further
downstream, but still encounter an error:
/usr/local/freesurfer/dev7/python/scripts/mri_sclimbic_seg --s GP0017-bpd/
--conform
Excluding seg [853]
Using CPU
Using 1 thread(s)
Loaded
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Hello again.
Please forget about my first question. I just realised I had moved my
Inga/local directory (new after installing freesurfer) before data
backup. Just moved it back and now iFS is running again.
But, I'm still new to infant freesufer, tryi
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Hello,
I'm new to infant freesurfer. I was initially relieved when a first run
of a test patient went through after I created mprage.nii.gz using
mri_convert.
1. Today I wanted to rerun it, but it gives me an error message although
the "original" file
