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Hi Ricardo,
For various reasons, this was never incorporated into FreeSurfer.
But you can see the instructions here on how to generate the annot in the
individual subject native space:
https://secure-web.cisco.com/1-Lh57J3Z9FOx9JwTNS4-BU2K0FotqC5GmQoz
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Thank you for getting back to me. You are correct in your in that the contrast
is C = (INT2-INT1)-(CON2-CON1). The measure of interest is SPC.
For the complete test we are trying to determine between group differences in
cortical thickness, adjusting
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- Hi there :)
- I am trying to run recon-all on MRI data; I have multiple sequences
including T1 maps and MAGiC. I have tried to run recon-all on these
sequences but get the same error each time:
-
- ERROR: 512, see /tmp/tmp.H88WWu.dcmdjpeg.out for more
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Dear FreeSurfer experts: I updated Freesurfer 7.0.0 on my ubantu system,
but there is something wrong so that I can't finish running recon-all
pipieline. It stopped at mris_fill in auto-recon2.And I don't know why. It
didn't happen when I use
Hi yvg,
It is most likely a memory error problem. You will need to allocate more RAM to
your calls. You probably need at least 32GB or RAM for such big images (might
be even more).
You can process the FLAIR images with mri_robust_template since they are
slighly smaller than your T1 images.
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Dear Samseg developers,
I have very high resolution T1 (512 x 512 x 240; voxel size: 0.469 x 0.469
x 1) and FLAIR images ( 384 x 384 x 128; voxel size: 0.495 x 0.495 x 1) and
I would like to process them with the longitudinal processing of samseg but
I
