Re: [Freesurfer] SynthSR: Illegal Hardware Instruction

2022-07-12 Thread fsbuild
External Email - Use Caution Hello Ahmed, This can result from how the code was compiled and/or optimized for older versions of MacOS - which may not translate well to running on newer versions of MacOS.  In your case, the the Mac is also running the Rosetta environment to tran

[Freesurfer] Passcode FreeSurfer 7.2.0

2022-07-12 Thread Gomez,Julieth
External Email - Use Caution Hello Freesurfer family, Could you please share the passcode to unzip the folder for the following release: Freesurfer 7.2.0 release in Ubuntu 18.04.06: FS_7_2_0_Ubuntu_18_04_06.ova.7z

[Freesurfer] CC mask in ASEG calculations

2022-07-12 Thread Ramtilak Gattu
External Email - Use Caution Hello all, We built a CC mask with 3 segments ( Genu, body and Splenium) and made it a part of the existing ASEG.mgz in "fsaverage" folder. Would like to incorporate this shown Corpus Callosum (CC) mask into aseg calculations replacing the existing

[Freesurfer] SynthSR: Illegal Hardware Instruction

2022-07-12 Thread Abdelkarim, Ahmed
External Email - Use Caution Hello I have an issue getting SynthSR working with FreeSurfer dev. I have MacBook Pro with apple M1 chip and MacOS Monterey. In bash terminal, after setting up FreeSurfer, and running the SynthSR command, I get this error ‘’Illegal instruction: 4’’. H

[Freesurfer] BV/CSF index and Sulcal CSF

2022-07-12 Thread Michele GRASSO
External Email - Use Caution Hello FreeSurfer Developers, My name is Michele Grasso and I am a student of the master's degree course in Computer Engineering at the University of Catania (Italy). I am interested in calculating the BV/CSF index [1] which is equal to the ratio betwe