Re: [Freesurfer] “Illegal instruction (core dumped)” in mri_synthseg and mri_synthsr

External Email - Use Caution Hello Gonzalo, We’re aware that some binaries will not run on older Intel processors that do not support AVX instructions.  You could try running it on a different machine with a newer intel CPU.  We’ve also has some reports about this on Apple hardw

[Freesurfer] “Illegal instruction (core dumped)” in mri_synthseg and mri_synthsr

External Email - Use Caution Hi: I tried to use mri_synthseg and mri_synthsr commands, but I got the error message "Illegal instruction (core dumped)". Any solution? I have the March 31st, 2022 version. Sincerely, Gonzalo Rojas Costa Department of Radiology Clínica las Cond

Re: [Freesurfer] Password for virtual machine

External Email - Use Caution Sending the info to your email shortly. - R. On Apr 1, 2022, at 13:03, Ogier, Stephen E. (Assoc) wrote:External Email - Use CautionHi, I’m getting started with FreeSurfer, and I was wondering if I could be s

[Freesurfer] Seeking beta testers for new Freesurfer help forum

Hello, FreeSurfer community, The FreeSurfer administrative team is working on transitioning the current FreeSurfer mailing list infrastructure to a new, more user-friendly platform called Discourse. We’re still finalizing the website, so we’re looking for potential beta testers for this new pla

[Freesurfer] Beta values

External Email - Use Caution Hello FreeSurfer Developers, I'm extracting beta values ​​from some analyzes and I would like to know if I'm extracting and interpreting these values ​​correctly. To extract the beta values ​​I used this command: mri_segstats --seg lh.cortisol_CSF.g

Re: [Freesurfer] license text

External Email - Use Caution Hi Krystal You can have a license key automatically emailed to you by filling out this webform https://secure-web.cisco.com/1dJn5w1252g7xwEmnTP0-OuKPrvRxy3bfVpdmTz5t7ST4BBv5lsV-dt9MjlOKKWnJ22uiAmLOvk90MgBZPxPxJSEvZv_mAmWocmdVaO0-mppHCdP-XMT1f7va0sJ4WIH

[Freesurfer] Medial prefrontal cortex

External Email - Use Caution Hi there, I would like to know if someone could tell me how i can measure the medial prefrontal cortex (mPFC) with freesurfer as i see it is displayed within the superior frontal but i would need only the mPFC. I thank you so much for your help. P

[Freesurfer] license text

External Email - Use Caution Dear Free Surfer experts, I just downloaded the newest version of Free Surfer. The system says FS_LICENSE=/home/developer/license.txt set in /home/developer/.bashrc does not point to a freesurfer license. Freeview will not run w/o a license - edit F

Re: [Freesurfer] WM error near the right putamen

External Email - Use Caution Dear Freesurfer experts, Sorry to post this issue again, but I'm not sure how to move forward with my data. I'd really appreciate any answer, because I'm under a lot of pressure. Using FS 7.1.0 I found inaccuracy of the WM surface near the putamen and