Re: [Freesurfer] Trac-all -prep -c error

Hi Ela - It ran fast because it's a relatively small data set (2mm resolution and 25 directions based on the log file). So that's not a problem. No errors in the log file as far as I can see. I'd recommend using the default settings for both the intra- and inter-subject registration. The new ve

[Freesurfer] Stanford Postdoctoral Fellow Position in Neuroimaging based Biomarkers of Chronic Pain

External Email - Use Caution DESCRIPTION The Systems Neuroscience & Pain Laboratory at Stanford University (SNAPL) is actively recruiting a postdoctoral fellow who will join our research project on chronic pain. Funded by the National Institute of Health and directed by Profes

Re: [Freesurfer] Making a Patch

External Email - Use Caution Can you describe exactly what you are doing on a click-by-click basis? On 1/4/2022 9:55 AM, Alison McDonnell wrote: External Email - Use Caution When I click on the region to keep it says "please move cursor to a valid vertex" but I can see

Re: [Freesurfer] Questions about contrasts

External Email - Use Caution Got it! Thank you so much, Laura. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Re: [Freesurfer] Questions about contrasts

The contrasts are for DODS, you will need different contrasts for DOSS. I just added something onto that web page for DOSS On 1/3/2022 10:10 PM, Laura Willers de Souza wrote: External Email - Use Caution Hi Douglas, Actually I have one more question. I went to look at the contrast

Re: [Freesurfer] Ventricle segmentation issue - ventricle mislabeled as white matter

Hi Jee Won and Priyanka, there are several things going on here. First, the original aseg (aseg.presurf.mgz) has these areas labeled as nothing (0); they show up as WM in aseg.mgz and aparc+aseg.mgz. Obviously, it would be good to have them properly labeled, but is this critical to your applica

Re: [Freesurfer] Making a Patch

External Email - Use Caution When I click on the region to keep it says "please move cursor to a valid vertex" but I can see the blue mark on the region On Sun 2 Jan 2022, 21:13 Douglas N. Greve, wrote: > You have to make sure that you click in the region that you want to keep

[Freesurfer] Research Fellow Position (7T Methods) in the SPM Team at WCHN, London, UK

External Email - Use Caution Dear All, *--* *UCL Queen Square Institute of Neurology* *Wellcome Centre for Human Neuroimaging* *(Senior) Research Fellow: Methods developer* *---