Re: [Freesurfer] Password

External Email - Use Caution Sending the info to your email address shortly. - R. On Oct 6, 2021, at 22:25, Francisco Polito haro wrote:External Email - Use CautionExternal Email - Use CautionDear Freesurfer team, Could yo

[Freesurfer] Password

External Email - Use Caution Dear Freesurfer team, Could you provide me the password for the user 'developer' of the VM Freesurfer installation? Many thanks in advance, Best regards, Francisco Polito, LFA ___ Freesurfer mailing list Free

Re: [Freesurfer] Source freesurfer functions into R Studio Terminal

External Email - Use Caution Hello Shrikanth, When you source the freesurfer setup script in your shell, e.g., bash, $ source $FREESURFER_HOME/SetUpFreeSurfer.sh - it sets your PATH, SUBJECTS_DIR and a few other variables.  It’s the addition to PATH of something like /usr/local/fr

Re: [Freesurfer] Source freesurfer functions into R Studio Terminal

External Email - Use Caution Hi Shrikanth, All commands can be called from R, there is nothing special about FreeSurfer commands in that regard. If the command is not found from R, there is an issue with the path. The easiest way to check that is to simply use the full path to

[Freesurfer] Source freesurfer functions into R Studio Terminal

Hello Freesurfer Developers, I had a freesurfer-Rstudio issue today which I solved by just working on a Linux shell script. However, I wanted to know if it is possible to send freesurfer related commands from R studio out of curiosity. My Problem: * I was trying to use freesurfer commands

[Freesurfer] error using mri_convert

External Email - Use Caution Hello FreeSurfer developers, I am attempting to use mri_convert to convert DICOM files to a NIfTI file. The DICOM images were obtained from a Siemens 3T Prisma scanner with VE11C software version. When mri_convert is run to convert the .dcm files to