Re: [Freesurfer] Problem with mri_glmfit-sim

2021-07-14 Thread juergen.haenggi
External Email - Use Caution Dear Douglas thanks for the information. I will try the work around or use the precomputed tables. Best Jürgen Am 09.07.2021 um 19:58 schrieb Douglas N. Greve mailto:dgr...@mgh.harvard.edu>>: I think this might be a bug. You might be able to get a

[Freesurfer] One year position, working with ADNI data.

2021-07-14 Thread ROBERT CARY WELSH
External Email - Use Caution Hi, Please see this posting. We are looking for an appropriate match for a 1-year NIH funded position. We are working on statistical modeling with ADNI data. We need a person that can hit the ground running. Only apply if eligible to work in the US

Re: [Freesurfer] Qdec vertex-wise clustering question

2021-07-14 Thread Alejandro Meruelo
External Email - Use Caution This is very helpful, thank you! Do the recon-all generated FreeSurfer data (e.g., surfaces) impact any of the statistical calculations or are they primarily used for figure generation for Qdec? Many thanks again, Alejandro On Mon, Jul 12, 2021 at 6:2

[Freesurfer] Hiring a web developer

2021-07-14 Thread Billah, Tashrif
The web developer will join a research laboratory at Harvard Medical School/Mass General Brigham. It is located in Boston, MA. Here is the job description: https://partners.taleo.net/careersection/ghc/jobdetail.ftl?job=3161646&tz=GMT-04%3A00&tzname=America%2FNew_York If you have any question, r

[Freesurfer] mcprextreg file structure and X

2021-07-14 Thread Erik Jahner
External Email - Use Caution Dear all, I am trying to figure out the structure of X.dat and where the mcprextreg parameters are in the table. It is my understanding that the mcprextreg is the resulting PCA on the motion to generate a nuisance variable for motion. I see the foll

Re: [Freesurfer] RAM per CPU for running Freesurfer 7.1

2021-07-14 Thread tibor.auer
External Email - Use Caution Hi Ajay, I also use clusters on a day-to-day basis, and my typical resource requirement includes 8GB RAM, which is enough for 80% of my use cases. However, I have not processed data with very high resolution (<1mm iso). Regarding core count, y