Re: [Freesurfer] MNI Coordinates from the Destrieux Atlas and aseg.stats ROIs

External Email - Use Caution Hello Freesurfer developers, I have deadline time to report these coordinates. I greatly appreciate your help and I'm looking forward to your kind response. Best regards, Hengameh On Fri, Nov 20, 2020 at 11:20 AM Hengameh Marzbani wrote: > Hello

[Freesurfer] Manual ROIs in PETSURFER

External Email - Use Caution Hello, I would like to draw a volume of interest on T1 images and then evaluate metabolism changes in this region. Is this possible to accomplish using PETSURFER? Thank you for your time,Jess ___ Freesurfer

[Freesurfer] mri_surf2surf (and mri_preproc) clarification

External Email - Use Caution Dear Freesurfer experts, The mri_surf2surf example 1 specifies that lh thickness is resampled onto the 7th order icosahedron. Does it place the lh.thickness curv into freesurfer space, or is it still in the subject's native space (i.e., pre-transformat

Re: [Freesurfer] License error on Windows Subsystem for Linux

Thanks Lunhao, I will follow up with you temporarily off-list to test some things out. Andrew From: on behalf of Shen Lunhao Reply-To: FS Help Date: Monday, November 23, 2020 at 1:27 AM To: FS Help Subject: Re: [Freesurfer] License error on Windows Subsystem for Linux External Emai

[Freesurfer] smooth longitudinal analysis {Disarmed}

External Email - Use Caution Dear Freesurfer experts, I am doing a longitudinal repeated measures analysis and I would like to know which smooth is better to use (with the mri_surf2surf command). In the repeated measures guide ( https://secure-web.cisco.com/1VH4PbpfczyEHmEvf-Dmw

[Freesurfer] Smoothing GWC mgh data

External Email - Use Caution Dear all, I computed the gray/white matter contrast using the function 'pctsurfcon' for an individual subject. The output is a .mgh file containing the GWC values for each vertex. It is possible to smooth these data using freesurfer? If it's not, there

Re: [Freesurfer] Error in longitudinal pipeline {Disarmed}

External Email - Use Caution Hello, could you check if the contrast matrix CM.C has the same number of columns as the design matrix X that was supplied to the lme_mass_fit_Rgw() (or possibly lme_mass_fit_vw()) function? The number of columns (and their respective meaning) need