[Freesurfer] mapping function of 3d coordinates of brain surface to latitude and longitude of a sphere

2020-10-11 Thread 정태곤
External Email - Use Caution Dear Mr.I want to map final processed cortical thickness data of 3d coordinate (each point on a brain surface) again onto inflated sphere(?h.sphere)so that cortical thickness can be represented with latitude and longitude of the sphere.But I couldn't fin

Re: [Freesurfer] [External] question about mri_segment_hypothalamic_subunits {Disarmed}

2020-10-11 Thread Zeng, Victor (BIDMC - Keshavan - Psychiatry)
We downloaded the tar.gz version of the mac FS dev. I'll try and download the .pkg. Perhaps it doesnt work as a tar.gz Victor Zeng Beth Israel Deaconess Medical Center Keshavan Lab -- From: fsbuild Sent: Thursday, October 8, 2020 7:29 PM To: freesurfer@nmr.mgh.ha

Re: [Freesurfer] Display results

2020-10-11 Thread Valentina Mancini
External Email - Use Caution Thank you for this answer. How should I load aparc a2009+aseg.mgz for visualization and load a color map with p-values? If I load the fsaverage with the command "tksurfer", then I can only load the lh.aparc.a2009s.annot label but I need Desikan an

Re: [Freesurfer] Regarding sMRI scans alignment

2020-10-11 Thread Rahul Sharma
External Email - Use Caution Dataset is taken from ADNI for Alzheimer's Disease Diagnosis. Subjects are different. We want to extract slice between an exact range for all scans but when we are extracting we are facing issue, for ex. I want 80th slice in sagittal view to be extracte

Re: [Freesurfer] Regarding sMRI scans alignment

2020-10-11 Thread Fischl, Bruce
Hi Rahul can you explain a bit more what you want? Is this the same subject imaged multiple times? Is it with the same sequence? cheers Bruce From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Rahul Sharma Sent: Saturday, October 10, 2020 3:16 AM To: F

Re: [Freesurfer] License Management

2020-10-11 Thread Fischl, Bruce
Hi Paul we don't really do much enforcement of the licenses, but it is important to our ability to get the resources to continue to maintain FreeSurfer that our license count reflects the size of our user base. So it would be great if you could request the number of licenses that accounts for y

[Freesurfer] License Management

2020-10-11 Thread Pawletta, Paul
External Email - Use Caution Hi, we want to use Freesurfer in our “Virtual Research Environment”, where many users can process their neuroimaging data with prebuilt pipelines. Our question is about the license management for each user. Would it be sufficient to obtain a general