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Hello Freesurfer developers,
Thank you for developing Freesurfer!
I am postdoc at UC Berkeley and I am using Freesurfer 6.0 to create
flat maps on which I draw my ROI's. The flat maps/patches are created in
TKSURFER.
However, I typically use Freeview
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Thanks for your help! I downloaded the patch, and the analysis is now running.
Hopefully, I will not run into any other issues with the permutation.
Jessica
---
Jessica Hua, M.A.
Cognitive and Emotional Control Lab
Doctoral Candidate Clinical Psycho
Hi Jason
looks like it is not finding your license file. Did you get one?
cheers
Bruce
On Tue, 7
Apr 2020, Ledesma, Jason wrote:
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Hi,
I am receiving an error when performing recon-all. See attached for recon-all
log. Thanks.
Sincerely,
Ja
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Hi,
I am receiving an error when performing recon-all. See attached for recon-all
log. Thanks.
Sincerely,
Jason Ledesma
Staff Research Associate
Phone: 1(424)571-7755
E-mail: jason.lede...@lundquist.org
__
It means CUDA-accelerated binaries/recons on the GPU are no longer supported
after freesurfer 6.0. I will make that clarification in the wiki page. Sorry
for the confusion.
Andrew
From: Frank Robert
Date: Tuesday, April 7, 2020 at 11:24 AM
To: "Hoopes, Andrew"
Cc: FS Help
Subject: Re: [Freesu
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Hello Dr. Hoopes
Does it mean that in Beta version 7, there is no GPU capability. But
stable version 7 still support the existing GPU capacity.. Is it correct?
BR
Frank
On Tue, Apr 7, 2020 at 10:06 AM Hoopes, Andrew
wrote:
> Hi Frank,
>
>
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Thank you so much Iglesias.
kate
On Tue, Apr 7, 2020, 9:48 AM Iglesias Gonzalez, Juan E. <
jiglesiasgonza...@mgh.harvard.edu> wrote:
> It should be fine but please make sure you correct by scanner in
> subsequent analyses.
>
> Cheers,
>
> /Eugenio
>
Hi Frank,
We still recommend this since freeview benefits from having a fast GPU.
best
Andrew
From: on behalf of Frank Robert
Reply-To: FS Help
Date: Tuesday, April 7, 2020 at 10:15 AM
To: FS Help
Cc: "frabob2...@gmail.com"
Subject: [Freesurfer] whether freesurfer version 7 still support G
It should be fine but please make sure you correct by scanner in subsequent
analyses.
Cheers,
/Eugenio
Juan Eugenio Iglesias
Senior research fellow
CMIC (UCL), MGH (HMS) and CSAIL (MIT)
http://www.jeiglesias.com
From: on behalf of Kate Marvel
Reply-To: Freesurfer support list
Date: Tuesda
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Hello Freesurfer team
I checked the freesurfer version 7.0. It says that " but for now you
should know that some features are not present in v7 (QDEC, GPU-capability,
and recon-all -make)."
https://surfer.nmr.mgh.harvard.edu/fswiki/dev7beta1
But
Hi An Lijun
The choroid is a plexus of ependymal cells that produce CSF. it is pretty
tough to segment and mostly we include it to get more accurate segmenations
of the hippocampus where it is adjacent to ventricle and the ventricles
themselves. I'm not sure I've ever seen any normative stats
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Dear Freesurfer experts,
I have a little question about the structure 'chorid-plexus', I am not very
deep in brain anatomy and function. Could anyone have a sense of what is
the normal range of this structure volume from Freesurfer reconall?
I found t
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Hi Freesurfer Community,
I have run Hippocampus subfield segmentation using scans from GE and
Siemens. The field of view (FOV) for GE and Siemens are different, with FOV
of 8 and 9 respectively. Will this affect the analysis since they have
different F
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