ps, and I meant to say that the non-WM will be labeled as WM.
On 8/6/2019 6:44 PM, Douglas N. Greve wrote:
> Then re-run with
> recon-all -s subject -autorecon2-wm -autorecon3
>
>
> On 8/6/19 6:42 PM, Greve, Douglas N.,Ph.D. wrote:
>> You should edit the wm.mgz. In these places, the WM will be lab
External Email - Use Caution
All,
I've tried the dev version with FS_HISTO_STD_THRESH set to 20, but I am
seeing the same error message.
hayashis@xps15-9560:~/test/deface/app-deface(master*) $ export
FS_HISTO_STD_THRESH=20
hayashis@xps15-9560:~/test/deface/app-deface(master*) $ .
Then re-run with
recon-all -s subject -autorecon2-wm -autorecon3
On 8/6/19 6:42 PM, Greve, Douglas N.,Ph.D. wrote:
> You should edit the wm.mgz. In these places, the WM will be labeled as
> non-WM. Just erase the mislabeled voxels.
>
> On 8/6/19 6:31 PM, Caroline Chwiesko wrote:
>> Exter
You should edit the wm.mgz. In these places, the WM will be labeled as
non-WM. Just erase the mislabeled voxels.
On 8/6/19 6:31 PM, Caroline Chwiesko wrote:
>
> External Email - Use Caution
>
> Hello Freesurfer experts,
>
> I wrote a previous email about my issue that in many of my subjec
Can you send command lines? Also, are you using the built-in permutation
tool or trying to do something outside of FS?
On 8/6/19 8:40 AM, Daliah Ross wrote:
>
> External Email - Use Caution
>
> Hi FreeSurfer experts,
>
> I have a couple of questions regarding mri_segstats tool for an
> a
Sorry, that should be
ftp surfer.nmr.mgh.harvard.edu
On 8/6/19 12:39 PM, Douglas N. Greve wrote:
> You can try it from the command line,
> ftp surfer.nmr.mgh.harvard.edut
> It will ask you for a user name; use your email address
> It will ask you for a password; use "anonymous" (no quotes)
> cd tr
You can try it from the command line,
ftp surfer.nmr.mgh.harvard.edut
It will ask you for a user name; use your email address
It will ask you for a password; use "anonymous" (no quotes)
cd transfer/incoming
put file.tar
On 8/6/19 6:30 AM, Reza Rahmanzadeh wrote:
>
> External Email - Use C
RESEARCH AND DATA ANALYST
LABORATORY FOR NEUROPSYCHIATRY AND NEUROMODULATION
MASSACHUSETTS GENERAL HOSPITAL, HARVARD MEDICAL SCHOOL
Background:
The Laboratory for Neuropsychiatry and Neuromodulation at the Massachusetts
General Hospital, Harvard Medical School, is seeking a full time Research and
External Email - Use Caution
Hi FreeSurfer experts,
I have a couple of questions regarding mri_segstats tool for an analysis on
vertex-wise cortical thickness data. We are attempting to compare maximum
cluster sizes among permutations. We are having trouble figuring out how to
get
