[Freesurfer] ERROR: nu_correct

External Email - Use Caution Hello Freesurfers, I'm running recond-all and getting ERROR: nu_correct. I see a lot of people online have had this problem but I've failed to found a solution. Any suggestions? I'm running freesurfer on a virtual machine and I've attached my recon-al

[Freesurfer] trouble converting between .mgz and .nii.gz

External Email - Use Caution Hello experts, As a sanity check in a pipeline I'm running I tried converting an atlas file containing visual ROIs from .mgz to .nii.gz and then immediately converting the resulting .nii.gz file back to .mgz: mri_convert lh.atlas.mgz lh.atlas.nii.gz -