[Freesurfer] Blood vessels FreeSurfer

2018-09-22 Thread Žaneta Železnikova
External Email - Use Caution Hello, I couldn't find a clear answer online but it's possible to visualize only blood vessels of the brain? Thank you ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.e

[Freesurfer] Problems with thalami nuclei segmentation

2018-09-22 Thread stdp82
External Email - Use Caution Hi list, 1- I have run the segmentThalamicNuclei.sh but .stats file has been not produced in any subjects. I have also try to re-run recon-all with dev version but fulling. 2 - Moreover, when I use the thalami segmentation as seed in FS-FAST I obt