We do not currently segment extra cerebral CSF. We will have this
segmentation in the next version.
On 11/21/17 9:00 AM, Sam D wrote:
Hello again FS experts,
Has anyone encounter this issue with FS CSF masks I described below?
I’ve reposted the issue here. I appreciate the help!
I am attem
Yes, for age and surface area.
On 11/23/17 2:05 AM, 郑凤莲 wrote:
Hi professors,
I am using Qdec in Freesurfer. I want to study the relationships
between age and cortical thickness, age and cortical volume, age and
surface area. Is it necessary to corrected by eTIV for volume and
surface ar
sorry, can you send me the details again?
On 11/21/17 10:24 AM, Klein, Gregory wrote:
Hello Donatas and Douglas,
Did you ever find a cause and solution for this problem? I too
occasionally get this error message, and cannot get the results of
mri_gtmpvc for certain subjects.
Any suggestion
One of them will be mni305 coordinates, the other an approximation of
talairach coordinates. I'd have to dig into the code to see which one
was which.
On 11/20/17 10:17 AM, Dongsheng Wu wrote:
Dear Freesurfer Developers,
I have two questions about coordinate of ROI when running the QDEC
mod
Use mri_label2label to create a mask (--outmask), then use
mris_apply_reg with --no-rev to map the mask into fsaverage space. With
all your subjects' masks in fsaverage space, run
mri_concat mask1 mask2 ... --mean --o mask.mean.mgh
On 11/20/17 8:40 AM, Luqi Cheng wrote:
Dear freesurfer expe
More covariates follows the same pattern as having one or two coviariates
On 11/20/17 9:18 PM, 박경일 wrote:
Dear experts,
I am trying to perform mri_glmfit to generate images indicating
cortical thickness differences between groups. My data has 6 or 7
covariates such age, sex, smoking, hyperte
what is your full command line and terminal output?
On 11/24/17 12:20 PM, Nick Corriveau-Lecavalier wrote:
Hi FS team,
I ran a mri_glmfit for a 3 groups comparison and now I'm trying to run
the cwp correction with mri_glmfit-sim command. When I type in my
command, it says:
ERROR: cannot
try mris_seg2annot Run it with --help to get examples
On 11/13/17 3:06 PM, Hengda He wrote:
Hi Freesurfer Developers,
I have a manually edited segmentation of the brain cortical regions,
and I want to map it to cortical parcellation labels on both white
matter surface and pial surface. So I
There is not time.dat file. CAn you send it?
On 11/13/17 4:28 PM, Conchy PF wrote:
Dear Douglas,
I did not save the full output from the beginning when I processed
this subject. I can send you what I get when I run the
mri_glmfit command. If you need this output, I can run another subject
