Re: [Freesurfer] [FreeSurfer] aparc.a2009s.stats, MeanCurv, GausCurv

2016-09-22 Thread Hanbyul Cho
Dear Bruce Fischl, Thank you for your explanation. Best wishes, Han On Thu, Sep 22, 2016 at 12:30 PM, Bruce Fischl wrote: > Hi Han > > they are computed using the white surface by default but you can easily > use another surface in mris_anatomical_stats. > > cheers > Bruce > > On Thu, 22 Sep

Re: [Freesurfer] [FreeSurfer] aparc.a2009s.stats, MeanCurv, GausCurv

2016-09-22 Thread Bruce Fischl
Hi Han they are computed using the white surface by default but you can easily use another surface in mris_anatomical_stats. cheers Bruce On Thu, 22 Sep 2016, Hanbyul Cho wrote: Dear FreeSurfer Team, I heard that theĀ  processed subjects/stats/?h.aparc.a2009s.stats included the integrated

[Freesurfer] [FreeSurfer] aparc.a2009s.stats, MeanCurv, GausCurv

2016-09-22 Thread Hanbyul Cho
Dear FreeSurfer Team, I heard that the processed subjects/stats/?h.aparc.a2009s.stats included the integrated rectified mean curvature value (MeanCurv) and integrated rectified Gaussian curvature value (GausCurv). I wonder that whether the integrated rectified curvature values are about pial surf

Re: [Freesurfer] freesurfer longitudinal data

2016-09-22 Thread Bruce Fischl
sure, you get each of those for the long runs as well cheers Bruce On Thu, 22 Sep 2016, Gabor Perlaki wrote: > Dear all, > > Is it possible to get simple ROI data (such as aseg.stats or aparc.stats in > case of cross-sectional analysis) as the result of the longitudinal > analysis, which can be

[Freesurfer] cluster feature extraction from qdec output

2016-09-22 Thread Damien MARIE
Dear experts, I would like to know what is the best and simplest way to extract cortical surface area and thickness from clusters obtained after a Monte Carlo correction. This is a group comparison I did with qdec including gender as discrete variable + age and mean thickness or whole hemispher

[Freesurfer] freesurfer longitudinal data

2016-09-22 Thread Gabor Perlaki
Dear all, Is it possible to get simple ROI data (such as aseg.stats or aparc.stats in case of cross-sectional analysis) as the result of the longitudinal analysis, which can be further analyzed by SPSS? Best Regards, Gabor ___ Freesurfer mailing list F