[Freesurfer] Fwd: bug report

2016-06-05 Thread siya sherif
FREESURFER_HOME: /usr/local/freesurfer Build stamp: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 Debian version: jessie/sid Kernel info: Linux 4.2.0-36-generic x86_64 - Please include the following additional information i

Re: [Freesurfer] SOLVED: Re: convert FSL atlas label to individual freesurfer T1 space

2016-06-05 Thread Daya P
Hi Heidi, Could you post your solution? Thanks, Daiana > On Jun 4, 2016, at 1:33 PM, Jacobs H (NP) > wrote: > > I figured it out :) > > From: H Jacobs > > Reply-To: Freesurfer support list > > Date: Saturday,

[Freesurfer] selxavg3-sess error with phase-encoded data

2016-06-05 Thread Francesca Strappini
Hi Freesurfer experts, I'm trying to analyze some phase-encoded data with the eccentricity protocol for retinotopic data and I'm having troubles with selxavg3-sess. I run the following commands: mkanalysis-sess -analysis OrderDisorder.idsubj.lh -surface idsubj lh -TR 2 -retinotopy 24 -paradigm r