You will need to run mri_aparc2aseg. This is how aparc+aseg.mgz is
created (see recon-all.log file for command). Is the V1 a label or an
annotation? If label, then you will need to convert it to an annotation
(mris_label2annot)
On 5/13/16 6:28 PM, John Anderson wrote:
Dear Experts,
I want t
Yes, if you set the clusterwise threshold to 0.05, you will only see
clusters that or more significant.
On 5/14/16 2:13 PM, maaike rive wrote:
Dear Freesurfer experts,
I have a question regarding tk surfer. If I load the
cache.h13.abs.sig.cluster.mgh file, I'll only see the clusters
survivin
by default it is sphere.reg. For this there is no reason to change it.
On 5/13/16 7:05 PM, std...@virgilio.it wrote:
> Thanks.
> I'm reading the surf2surf help but I do not understand the --trgsurfreg
> options.
> I'using
> mri_surf2surf --hemi rh --srcsubject fsaverage --srcsurfval thickness --
>
Dear Freesurfer experts,
I have a question regarding tk surfer. If I load the
cache.h13.abs.sig.cluster.mgh file, I'll only see the clusters surviving the
statistical threshold I set, don't I? (e.g. I set the cluster finding
threshold at 0.05 (Monte carlo simulation), keeping all clusters with
