[Freesurfer] mritotal

2015-08-23 Thread Ali Radaideh
Dear Freesurfer Experts, I have finished the recon-all for 30 subjects successfully. However, I started to get the following error for the remaining subjects (8 subjects) ​mritotal -verbose -debug -clobber -modeldir /usr/local/freesurfer/mni/bin/../share/mni_autoreg -protocol icbm transforms/tmp.

[Freesurfer] Did not find any volume geometry information in the surface

2015-08-23 Thread car...@van-vlodrop.de
Dear Freesurfer experts,   I have run a Monte Carlo simulation and uploaded the results in freeview with the following command:   $ freeview –f /data/projects/oertelmatura/Neurodegeneration/fsaverage/surf/lh.inflated:overlay=/data/projects/oertelmatura/Neurodegeneration/qdec/MonteCarlo5000/lh-