Re: [Freesurfer] Preproc-sess failed

Hi, "yum remove libXp.i386" command returns with *No Packages marked for removal* This is my output for:'file $FREESURFER_HOME/bin/3dvolreg.afni' */usr/local/freesurfer/bin/3dvolreg.afni: ELF 64-bit LSB executable, x86-64, version 1 (GNU/Linux), statically linked, stripped* 2015-06-26 16:19 GMT+0

Re: [Freesurfer] extracting cluster stats from qdec output

Hi Francois the lh.thickness.fsaverage.mgh is in FS average space and has the same # of entries as fsaverage has vertices (160K or so). My guess is that your annot file is in individual subject space (which usually means less than 160k vertices). If so, you will need to transform it into fsave

[Freesurfer] extracting cluster stats from qdec output

I'm trying to extract thickness, area and volume stats from individual subjects using clusters generated from a qdec analysis. The command I'm using is: mris_anatomical_stats -a /Users/flalonde/Desktop/WAGR_freesurfer5.3/qdec/Untitled/lh-Diff-HV-PAX6-Intercept-area/mc-z.abs.th20.sig.ocn.annot

Re: [Freesurfer] FW: FW: Functional group analysis

Hi Silas Doug (who normally answers this kind of question) is on vacation. Can you repost in a few days? cheers Bruce On Sun, 28 Jun 2015, Silas wrote: Dear all, Can anyone help me with this question? Best, Silas

[Freesurfer] FW: FW: Functional group analysis

Dear all, Can anyone help me with this question? Best, Silas From: silasniel...@hotmail.com To: freesurfer@nmr.mgh.harvard.edu Date: Wed, 24 Jun 2015 11:35:28 +0200 Subject: [Freesurfer] FW: Functional group analysis Dear FreeSurfer team, I'm working on a functional analysis using FreeSurfer.

Re: [Freesurfer] Freesurfer tool for children's data

Yes perfect! If I get it end ofJuly, that would be perfect! Thanks a lot. Best wishes, Kristina Von: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu]" im Auftrag von "Lilla Zollei [lzol...@nmr.mgh.harvard.edu] Gesendet: Frei