Re: [Freesurfer] hello freesurfer developer~

2015-04-04 Thread A-reum Min
Hello Bruce~ You're right.. my PISA dicom file header is too short so, freesurfer didn't read it. Therefore I use another subjects dicom file and then freesurfer read it! thank you for u r adavice to me. I really appreciate u 2015-04-05 7:08 GMT+09:00 Bruce Fischl : > Hi A-reum > > the probl

Re: [Freesurfer] hello freesurfer developer~

2015-04-04 Thread Bruce Fischl
Hi A-reum the problem is that newer versions of scanner software compress dicoms and the version of FS you have doesn't know how to read it. So you need to decompress them before passing them to recon-all cheers Bruce On Sun, 5 Apr 2015, A-reum Min wrote: Hello developer~   Can you summa

Re: [Freesurfer] hello freesurfer developer~

2015-04-04 Thread A-reum Min
Hello developer~ Can you summarize what the problem is? ==> my problem is recon-all -i didn't working... so, if i type the recon-all -i~ then show up theses ERROR: 32512, see /tmp/root.tmp.decompressed.dcm.55srMV.dcmdjpeg.out for more de

Re: [Freesurfer] hello freesurfer developer~

2015-04-04 Thread Bruce Fischl
Hi A-reum sorry, I'm coming into this late. Can you summarize what the problem is? Are you trying to read compressed dicom? If so, can you try running dcmdjpeg on it to create a new (uncompressed) series and give that to recon-all? cheers Bruec On Sat, 4 Apr 2015, A-reum Min wrote: Hel

Re: [Freesurfer] hello freesurfer developer~

2015-04-04 Thread A-reum Min
Hi developer So.. i can't use a freesurfer now..? Do i have to wait until May? I must use the freesurfer now.. because to write an abstract until april 8th ㅜㅜ so i really want to use a freesurfer... Is there any way I can use a freesurfer? Does not work. Can I get a old version? 2015-04-04 22:17

Re: [Freesurfer] hello freesurfer developer~

2015-04-04 Thread Z K
A-reum, Unfortunately it looks like the feature you require will not be fully implemented until the freesurfer v6 which is tentatively scheduled for release in May. -Zeke > On Apr 4, 2015, at 1:49 AM, A-reum Min wrote: > > Hello developers.. > > i type the recon-all -i~ > then show up thes

[Freesurfer] R: Re: R: Re: isxconcat-sess problem

2015-04-04 Thread stdp82
No, do you think that a folder is lacking (please see below)?Thanks Stefano Messaggio originale Da: gr...@nmr.mgh.harvard.edu Data: 3-apr-2015 7.34 A: Ogg: Re: [Freesurfer] R: Re: isxconcat-sess problem do you have another double dash (--s) in the command line?