Hi,
In an fMRI experiment, I have 60 conditions. I want to make ALLvsFIX
contrast to select vertices that are visually responsive, by finding
vertices that have ces values greater than zero in this contrast. For
this, I can run:
mkcontrast-sess -analysis analysisname -contrast allvsfix -a 1 -a 2
Hello,
I have been running recon-all and trac-all analyses through remote access on
the openmind.mit.edu cluster (from a windows7 i7 laptop using MobaXterm). The
following software was set available:
module add openmind/fsl/5.0.7
module add openmind/freesurfer/5.3.0
module add openmind/gi
Would it be possible to send us your annoy file? Are you using the latest dev
version of freeview or the one with 5.3 release?
Best,
Ruopeng
On Nov 29, 2014, at 4:51 AM, angela.fav...@unipd.it wrote:
> Hi all,
> I have a problem with freeview and I am not sure about the command line to
> be us
thank you!
> Hi Angela
>
> that actually looks ok. It should follow the gray/white boundary I
> believe. Have you looked at it in the individual subject space without
> mapping it to the MNI coords? I think there are options in mri_label2vol
> to
> fill in the whole cortical ribbon instead of just
