Re: [Freesurfer] sMRI using Freesurfer 5.1 followed by DTI using Freesufer 5.3

2014-09-15 Thread pras...@zoho.com
Say, following the set of commands given on the FsTutorial/Diffusion page (freesurfer.net/fswiki/FsTutorial/Diffusion) > On 15 Sep 2014, at 10:26 pm, Bruce Fischl wrote: > > what kind of DTI analysis? >> On Sun, 14 Sep 2014, prasser wrote: >> >> Hi, >> >> Could you please let me know if it's

Re: [Freesurfer] problems with tracula pre-processing (bvecs)

2014-09-15 Thread Michele Cavallari
errata corrige: it did work! I had to re-run the whole thing including only that specific tract...and eventually it worked. On Fri, Sep 12, 2014 at 11:19 AM, Michele Cavallari < cavallari.mich...@gmail.com> wrote: > Tried...unfortunately it didn't improve > > On Thu, Sep 11, 2014 at 4:56 PM, Chri

[Freesurfer] Postdoctoral position at Northwestern University

2014-09-15 Thread Derin J Cobia
(Posted on behalf of a colleague) A postdoc position is available immediately in the Neuroimaging and Applied Computational Anatomy Lab, Department of Psychiatry and Behavioral Sciences at the Northwestern University Feinberg School of Medicine. Our laboratory aims to

Re: [Freesurfer] Cortical gray matter surface area

2014-09-15 Thread Douglas N Greve
correct, unfortunately, the "White" label is hard coded into the program. On 09/14/2014 02:24 AM, will brown wrote: > Thanks Doug, > > Just to double check I understand you correctly, where the output says > "# Measure Cortex, WhiteSurfArea, White Surface Total Area" this is > now the surface ar

Re: [Freesurfer] sMRI using Freesurfer 5.1 followed by DTI using Freesufer 5.3

2014-09-15 Thread Bruce Fischl
what kind of DTI analysis? On Sun, 14 Sep 2014, prasser wrote: > Hi, > > Could you please let me know if it's okay to use subjects analyzed using > Freesurfer 5.1 (os x 10.6) for DTI analysis using Freesurfer 5.3 (os x > 10.8)? > > Thanks. > > > > > __