Re: [Freesurfer] Fwd: Surface statistics for PET

2012-08-26 Thread Douglas Greve
Hi Daniel, qsurfer has not been supported in a long time. Just use tksurfer, something like tksurfer subjectname lh inflated -aparc -overlay outputofvol2surf.mgh doug On 8/26/12 5:05 PM, Daniel Tarquinio wrote: Hi Bruce, I'm sorry I didn't ask the correct question - I was able to generate th

[Freesurfer] Fwd: Surface statistics for PET

2012-08-26 Thread Daniel Tarquinio
Hi Bruce, I'm sorry I didn't ask the correct question - I was able to generate the .mgh file with mri_vol2surf without problem. The issue was that "qsurfer" gives me an error stating it couldn't find the .w file. According to usage it needs a file ending in -?h.w. Is there a way to use a .mg

Re: [Freesurfer] Surface statistics for PET

2012-08-26 Thread Bruce Fischl
sure, use mgh as the output format of mri_vol2surf. cheers Bruce On Sun, 26 Aug 2012, Daniel Tarquinio wrote: Thank you Doug, that worked perfectly. Regarding the .w file, to view the functional data inflated I used this tutorial: http://poc.vl-e.nl/distribution/manual/fsl-3.2/freesurfer/inde