Bevil:
Please take the FreeSurfer list out of your personal email list. How is your
personal agenda of any relevance to the entire FreeSurfer group?
Alan
On Wed, Jan 12, 2011 at 10:48 AM, Bevil R. Conway wrote:
> I will be out of the country from Jan. 10 - Jan 18, 2011, and will not
> have acc
Hi Xi-Nian,
could you send us an example?
cheers,
Bruce
On Thu, 13 Jan 2011, Xinian Zuo wrote:
> Hi, FSers,
>
> Sorry for sending again. I am using FS5. 0 to extract brain mask for
> other analyses. I found there were always some zero intensities within
> voxels of some CSF, thus lead to a brai
Hi, FSers,
Sorry for sending again. I am using FS5. 0 to extract brain mask for
other analyses. I found there were always some zero intensities within
voxels of some CSF, thus lead to a brain mask with some small holes
inside after binary operation. Is there a way of filling them? Thanks!
--
Xi-N
Thanks to both of you.
Cheers.
> no we haven't done them
> On Wed, 12 Jan 2011, Christophe Destrieux wrote:
>
>> I meant : am i right to think that we don't have any other parcellation
>> available showing the other labels Fidel would like to use ?
>> (I thought that maybe somebody localized thes
Dear Freesurfers,
I keep fighting with my 64bit-CentOS in order to configure my videocard
(ATI Radeon Sapphire HD 5750) for FS. At last I got rid of "segfault
error". And now there is another error (after tkmedit command):
=
X Error
no we haven't done them
On Wed, 12 Jan 2011, Christophe Destrieux wrote:
> I meant : am i right to think that we don't have any other parcellation
> available showing the other labels Fidel would like to use ?
> (I thought that maybe somebody localized these structures in a way similar to
> what
I meant : am i right to think that we don't have any other parcellation
available showing the other labels Fidel would like to use ?
(I thought that maybe somebody localized these structures in a way similar to
what you did for the entorhinal cortex in your exvivo/invivo 2008 paper)
cheers
--
Dear all,
I'm very happy to announce new release of nipype - the pipelining
framework that allows you to combine FSL, SPM, FreeSurfer, Nipy and
other neuroimaging packages. Among other changes (see the full list
below) this release brings support for surface transformations, flash
processing and fl
Do you want to transfer the actual surfaces back to the scanner
coordinates? Or do you want a segmentation of the surfaces in scanner
coords?
doug
a.jans...@neuro.umcn.nl wrote:
>
> Hello FS experts,
>
> I am a new FS user and I could use some help concerning translating
> surfaces. I have com
yes, hippocampus is in the aseg
On Wed, 12 Jan 2011, Christophe Destrieux
wrote:
> not that I know, except for hippocampus which is available on the volume
> segmentation
>
> Bruce : am I right?
>
> cheers
>
>
___
Freesurfer mailing list
Freesurfer@nmr
That is correct.
doug
Jose Luis Cantero Lorente wrote:
> Dear all,
>
> I have a data set with a diagnosis factor (three groups) and four
> covariates, the fsgd.txt file is pasted below:
>
>
>
> GroupDescriptorFile 1
>
> Title Thickness-subj
>
> Class control
>
> Class EHM
>
> Class NEHM
>
> va
Hello FS experts,
I am a new FS user and I could use some help concerning translating
surfaces. I have completed the FS pipeline using my own data with the
autorecon all command. I now want to combine the .pial and .wm surfaces
with the rest of my data. Therefore I have to translate the surface
I will be out of the country from Jan. 10 - Jan 18, 2011, and will not
have access to email. For issues concerning my laboratory, please contact
my lab manager, Rosa Lafer-Sousa (rlafe...@wellesley.edu).
Thank-you and I'll be in touch when I get back.
Bevil
__
not that I know, except for hippocampus which is available on the volume
segmentation
Bruce : am I right?
cheers
--
Christophe Destrieux,
Directeur du Département Communication et Multimedia
http://med.univ-tours.fr/M0S01/0/fiche___defaultstructureksup/&RH=1200651159612
Unité « Imagerie e
Hi mr Destrieux,
Does this mean that those structures cannot be found in ANY segmentation
or labelling made by freesurfer?
Thanks again for your quick answer,
Fidel.
> Hi Fidel
>
> as stated in the paper you cited, the intralimbic gyrus is made of :
> prehippocampal rudiment, indusium griseum
Hi Fidel
as stated in the paper you cited, the intralimbic gyrus is made of :
prehippocampal rudiment, indusium griseum and hippocampus. Only the latter vas
clearly visible on the MR scans used to build the atlas, but was not correctly
unfolded. For this reason the intralimbic gyrus can not be
Hi Freesurfer experts,
I would like to know what are the equivalent labels to
- Gyrus Intralmibic
- Sulcus semmi annularis
In the label file FreeSurferColorLUT.txt. I have checked the paper
"Automatic parcellation of human cortical gyri and sulci using standard
anatomical nomenclature" but the
Dear all,
I have a data set with a diagnosis factor (three groups) and four covariates,
the fsgd.txt file is pasted below:
18 matches
Mail list logo
