I am a little out of the loop. Just to clarify, Marie is trying to
create an average subject out of 400+ subjects that have been run
through the freesurfer pipeline? I don't see a problem with that
(except possibly memory issues). If the subjects are from a
homogeneous population (whatever
Marie,
The memory leak in mri_average has also been fixed. The new version is
in the same ftp location as mris_make_average_surface.
N.
On Mon, 2010-06-07 at 14:43 -0400, Nick Schmansky wrote:
> Marie,
>
> I fixed the memory leak that was causing your out-of-memory error when
> running mris_ma
Marie,
I fixed the memory leak that was causing your out-of-memory error when
running mris_make_average_surface. A new mris_make_average_surface for
Mac Intel Leopard is posted here:
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/macos-leopard-intel/
I'm still looking into the mri_av
I am having a problem using tksurfer. It does not appear to be the same
issue that others have had in the past with NVIDIA drivers etc.
When I try to load a surface file the entire process freezes and eventually
if I let it run, I will get the following error:
gkl...@gklein-nspc:~$ tksurfer CL lh f
Hello freesurfers!
After creating some labeling files from aparc.a2005s.annot, I noticed that my
sulci and gyri volumes generated from the .label files (i.e., after running
mri_annotation2label and mri_label2vol) were only representing the outer layer
of the white surface. Is there any way to g
Hello all!
After creating some labeling files from aparc.a2005s.annot, I noticed that my
sulci and gyri volumes generated from the .label files (i.e., after running
mri_annotation2label and mri_label2vol) were only representing the outer layer
of the white surface. Is there any way to generate
Dear FS experts,
I have a anatomical scan of a subject with a rare neurogenetical disorder. I'd
like to compare this with a age matched control group.
How can I visualize a z-score transform map of the cortical thickness, i.e. how
would I compute and vizualize
the number/amount of standard devi
When I load the file directly to load_mgh I still get the error
ERROR: could not open
/home/freesurfer4.4.0/subjects/corinna/ADNI/003_S_1057/mri/lh.white.projfrac35.mgh
for reading
??? Attempt to reference field of non-structure array.
Error in ==> gwratiotest at 5
gray2=gray.vol;
here
