Hi Attila,
the volume in the aseg.stats is partial-volume corrected so they don't
have to be the same.
cheers,
Bruce
On Sat, 11 Jul 2009, Krajcsi Attila wrote:
Hi,
If I want to run a functional ROI according to this:
http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultiModalFmriGroup#Gr
Hi,
If I want to run a functional ROI according to this:
http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultiModalFmriGroup#GroupROIfMRIAnalysis
,
is it possible to have the subjects' name in the output file?
Is it possible that the volume of an unmasked region (region defined only by
anatom
hmmm, no idea why this would happen. Do you want to put it on the
filedrop for us (we'll need everything to run mri_surf2surf to replicate
the error)
On Sat, 11 Jul 2009, Lars M. Rimol wrote:
Yes, I can load it as an overlay in tksurfer.
Here's the mri_info output:
[...@localhost area]$
Yes, I can load it as an overlay in tksurfer.
Here's the mri_info output:
[...@localhost area]$ mri_info TOP_sm100_lh_cc2_11072009.mgh
Volume information for TOP_sm100_lh_cc2_11072009.mgh
type: MGH
dimensions: 163842 x 1 x 1 x 216
voxel sizes: 1., 1., 1.
type: FLOAT (3)
f
hmm, not sure what's going on. Can you also send the output of mri_info?
If you try to load the file as an overlay in tksurfer does it work?
On Sat,
11 Jul 2009, Lars M. Rimol wrote:
Hi Bruce,
Yes, mri_info works on all these files, and it states that it's an mgh file and
the dimensions l
Hi Bruce,
Yes, mri_info works on all these files, and it states that it's an mgh file and
the dimensions look allright and it says: type FLOAT (3).
Here's the output for the left hemisphere (with command line)
[...@localhost area]$ mri_surf2surf --s fsaverage --sval
/home/lmr/subjec
Yes, type 3 is an MGH/MGZ file.
On Jul 11, 2009, at 1:42 PM, Bruce Fischl wrote:
Hi Lars,
can you send us the whole command line and output? I think type 3 is
an MGH/MGZ file. Does mri_info work on it properly?
cheers
Bruce
On Sat, 11 Jul 2009, Lars M. Rimol wrote:
Hi,
What does it me
Hi Lars,
can you send us the whole command line and output? I think type 3 is an
MGH/MGZ file. Does mri_info work on it properly?
cheers
Bruce
On Sat, 11 Jul 2009, Lars
M. Rimol wrote:
Hi,
What does it mean when mris_surf2surf produces the error message that the input file
cannot be re
Hi,
What does it mean when mris_surf2surf produces the error message that the input
file cannot be read "as type 3" ?
The file is an .mgh which I converted from an .mgz using mri_convert
(mri_convert oldfile.mgz newfile.mgh). I get the same error when I use the .mgz
file.
Thank yo
