you can get something like what you want with
cd $SUBJECTS_DIR/subject
mri_binarize --i mri/ribbon.mgz --min .0001 --o mri/tmp.mgh
mri_tessellate mri/tmp.mgh 1 surf/lh.both
mris_smooth -nw surf/lh.both surf/lh.smboth
tksurfer subject lh smboth
Note that eventhough you call it "lh" it has both h
I see. Sorry, we don't have any easy-to-use tools for creating a single
pial surface. You could change the value in the filled.mgz so that lh and
rh are the same and try tesselating/deforming it. I've done this in the
past, but you have to mess around a bit to get it to work.
cheers,
Bruce
O
On Sun, 22 Mar 2009, Avram Holmes wrote:
All,
I have generated a mask of the cingulate regions for each of my participants
from their aparc+aseg.mgz files (see attached image) and I would like see how
these masks overlay with the group average brain I have generated for my
study. Is there a
