[Freesurfer] X11 - FreeSurfer hot-key problem Mac

Hello, I wonder if anyone else has had this problem on the Mac. I have now installed FreeSurfer (Tiger V4.0.5) on 3 machines, everytime I do this some of my shortcut X11 keys stop working. We are running - X11 1.1.3 - on a Mac OS X 10.4.11 I would really appricate your help with this - Does

Re: [Freesurfer] tkmedit --> tksurfer (tkmedit points not being saved)

Aaron and Bruce, Looks like tkmedit saves edit.dat in the directory from which it is invoked, but tksurfer tries to load edit.dat from the tmp/edit.dat in the subject dir. A simple workaround is to setenv a variable called FS_SAVE_GOTO_POINT to a filename where you want both tkmedit and t

Re: [Freesurfer] ICV accuracy

Hi Jared, you can load the source (nu_noneck.mgz) and target (/autofs/space/tensor_004/users/fischl/dev/freesurfer/average/RB_all_withskull_2006-02-15.gca) volumes in tkregister2 with the transform (transforms/talairach_with_skull.lta) to check the alignment. cheers, Bruce On Thu, 12 Jun