Re: [Freesurfer] thickness and make_average_subject

2007-09-26 Thread Doug Greve
which version are you using? This was a problem with 3.X but should be fixed with 4 Cameron Ellis wrote: Hi all, I am using make_average_subject to generate average subjects for two groups in a study. The average subjects' surfaces are created with no errors. However, I am curious why I cannot

[Freesurfer] thickness and make_average_subject

2007-09-26 Thread Cameron Ellis
Hi all, I am using make_average_subject to generate average subjects for two groups in a study. The average subjects' surfaces are created with no errors. However, I am curious why I cannot get the thickness file generated to appear on the surface. After I have the inflated average surface open, wh

Re: [Freesurfer] How to read out wmparc

2007-09-26 Thread Doug Greve
you can use asegstats2table passing it --statsfile wmparc.stats doug Juergen Haenggi wrote: Dear Freesurfer users Is there a similar function like asegstats2table or aparcstats2table in order to read out wmparc.stats? Thanks Best regards Juergen Haenggi -

Re: [Freesurfer] High-resolution limits of FS4

2007-09-26 Thread Bruce Fischl
Hi Morgan, you can be fooling it into thinking that the 0.5mm voxels are actually 1mm, but haven't tested it very much. Getting it to work at that kind of resolution natively is on our list of things to do Bruce On Wed, 26 Sep 2007, Morgan Hough wrote: Hi there, I just wanted to che

[Freesurfer] High-resolution limits of FS4

2007-09-26 Thread Morgan Hough
Hi there, I just wanted to check on the spatial resolution limits of FS4. Is it possible to process a whole-brain, 0.5mm isotropic voxel size volume without downsampling it? Thanks in advance. Cheers, -Morgan ___ Freesurfer mailing list Freesurfer@

[Freesurfer] How to read out wmparc

2007-09-26 Thread Juergen Haenggi
Dear Freesurfer users Is there a similar function like asegstats2table or aparcstats2table in order to read out wmparc.stats? Thanks Best regards Juergen Haenggi --- Juergen Haenggi Ph.D. (Dr. des.) Division of Neuropsychology Institute of