Hi Aaron,
I don't think that there is a limit. What makes you think so? Or did I
say so at one points?
doug
On Fri, 15 Jun 2007, Goldman, Aaron (NIH/NIMH) [C] wrote:
Hi, I was wondering if there was any way with mri_glmfit to override the
limit of 500 subjects. I'm only barely above, but wa
Hi, I was wondering if there was any way with mri_glmfit to override the
limit of 500 subjects. I'm only barely above, but wanted to avoid
arbitrarily excluding people if it's practical. Thanks,
-Aaron-
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Hi,
The two mri/orig/xxx.mgz files load in tkmedit with the orientations
correctly assigned.
When I load rawavg.mgz, I get the following message (which seems relevant),
and then it loads with the coronal and sagittal orientations swapped.
% [catherine:phelpslab/Cate/extinction] cate% tkmedit AS0
Hello,
On Freesurfer 3.0.4, I used 'mri_annotation2label' to derive a set of
labels from the Desikan atlas annotation file (lh.aparc.annot).
If I then run mris_anatomical_stats using the label files,
e.g.,
mris_anatomical_stat -l lh.bankssts.label $subj lh
the resulting statistics that are out
are the mri/orig/XXX.mgz files ok? What about the mri/rawavg.mgz?
Catherine Hartley wrote:
Hi,
I just ran autorecon1 on a batch of data and when I view the brainmask in
tkmedit, selecting the coronal orientation actually displays the sagittal
orienation and vice versa (horizontal is fine). Al
Hi Cate,
what was the volume to autorecon1? Does it display properly in tkmedit?
Bruce
On
Fri, 15 Jun 2007, Catherine Hartley wrote:
Hi,
I just ran autorecon1 on a batch of data and when I view the brainmask in
tkmedit, selecting the coronal orientation actually displays the sagittal
oriena
Hi Don,
these matrices are all very tricky. Try looking at:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/fscoordinates.ppt
I don't the the lta is documented in there explicitly, but it has the
same interpretation as the MNI xfm.
doug
Don Hagler wrote:
Hi Bruce,
I thoug
