Re: [Freesurfer] Installatin question

2006-09-26 Thread Nick Schmansky
After the file is downloaded, you can confirm its integrity by checking against the md5sum number for the file shown in the table on the download page at: https://surfer.nmr.mgh.harvard.edu/fswiki/Download I suspect the file was corrupted somewhere in the download/transfer. On Tue, 2006-09-26 a

[Freesurfer] Installatin question

2006-09-26 Thread XJ Kang
Hi,  I am using Readhat Enterprise WS 3 on an AMD 64-bit machine.  Here is my info: %cat /etc/redhat-release Red Hat Enterprise Linux WS release 3 (Taroon Update 2) %uname -m x86_64 Therefore, I downloaded freesurfer-Linux-centos4_x86_64-stable-pub-v3.0.3-full.tar.gz. When I tried to untar

Re: [Freesurfer] cotical surface labeling...

2006-09-26 Thread Doug Greve
Use mri_label2vol, not mri_surf2vol. doug Behrang Nosrat Makouei wrote: Hi again, I am trying to convert a surface segmentation into a volume file, here is the command I am using:   mri_surf2vol --surfval (???) --hemi lh --surf orig --volregidentity c2 --template ../mri/rawavg.mgz --

Re: [Freesurfer] tksurfer time course script help

2006-09-26 Thread Kevin Teich
> 1. Save the time course window in //.ps Graph_SaveToPS e.g. Graph_SaveToPS /tmp/graph.ps > 2. Select only some of the contrasts for display (e.g., we have contrasts > 0-7 and only want to display 1, 2, and 3) set gGraphSetting(,visible) <0|1> Where color is one of: Red Green Blue Purple B