RE: [Freesurfer] no brain.tri and brain.mgz

You should have brainmask.mgz after -autorecon1 though. Jenni -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Nick Schmansky Sent: Thursday, August 10, 2006 6:55 PM To: Jiansong Xu Cc: Freesurfer Mailing List Subject: Re: [Freesurfer] no brain.tri and bra

Re: [Freesurfer] no brain.tri and brain.mgz

The brain.mgz file won't appear until after the -autorecon2 stage. Refer to this page for files output at each recon-all stage: http://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllDevTable On Thu, 2006-08-10 at 15:16 -0700, Jiansong Xu wrote: > Dear Friends: > > I'm playing with the tutorial. >

[Freesurfer] no brain.tri and brain.mgz

Dear Friends: I'm playing with the tutorial. I didn't get the brain.tri and brain.mgz files after the first step, see below for the command: recon-all -subjid bert -autorecon1 Best Jiansong ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard

Re: [Freesurfer] single button mouse

Select the X11->Preference option, then click on the 'Emulate three button mouse' option. This allow emulating a right click by holding down the Command key and mouse clicking, and emulating a middle click by holding down the Option key and mouse clicking. Left click is the default click

[Freesurfer] single button mouse

Dear Friend: I'm using Mac OSX with single button mouse. How can I deal with "right click", "middle click", and "left click" Thanks Jiansong ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/

Re: [Freesurfer] Copying control points file?

that should be okay On Thu, 10 Aug 2006, Jake Freimer wrote: If I have the same subject on 2 different computers, but I edited the control points on one, can I just copy the tmp/control.dat file over to the other computer and rerun autorecon2-cp, or are there other files it refrences? Thanks _

Re: [Freesurfer] Copying control points file?

I think that should work. Jake Freimer wrote: If I have the same subject on 2 different computers, but I edited the control points on one, can I just copy the tmp/control.dat file over to the other computer and rerun autorecon2-cp, or are there other files it refrences? Thanks -- -Jake

[Freesurfer] Copying control points file?

If I have the same subject on 2 different computers, but I edited the control points on one, can I just copy the tmp/control.dat file over to the other computer and rerun autorecon2-cp, or are there other files it refrences? Thanks-- -Jake ___ Freesurfer