[Freesurfer] output from single subject sphere morph to atlas

2006-07-26 Thread Lars M. Rimol
Hi, Is the determinant of the Jacobian matrix for the sphere morph to atlas space saved vertex by vertex? If so, where is it saved? -- yours,LMR ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/

Re: [Freesurfer] recon-all exited with ERRORS

2006-07-26 Thread Nick Schmansky
libstdc++ is the standard C++ library. if your Linux has libstdc+ +.so.5, then the rh9 build of freesurfer should be used. the centos builds of freesurfer use libstdc++.so.6. or, libstd++.so.6 can be downloaded from the web and installed (google 'libstdc++ rpm'). On Wed, 2006-07-26 at 14:38 -0

[Freesurfer] recon-all exited with ERRORS

2006-07-26 Thread Chacko Cherian
Hello all, I was running recon-all for one of my images and this happened to be the error that i got.what is libstdc++?? Could someone please clarify, Thanks in advance Chacko. "mri_watershed: error while loading shared libraries: libstdc++.so.6: cannot open shared object file: No such file or

Re: [Freesurfer] display SPM group results

2006-07-26 Thread Thomas Stephan
For now just visualization of results. I received a reply from Itamar Kahn yesterday which I would like to post to the list with this mail: Although partially overlapping what you've done already the following SPM toolbox enables you to overlay your data on the SPM canonical brain (colin27),