[Freesurfer] mris_ca_label 32vs64

2005-11-16 Thread Satrajit Ghosh
I'm noticing some discrepancies between the 64 bit and the 32 bit version of mris_ca_label. I've shown the output from the 64 bit version and the 32 bit version operating on the same subject. I'm using are the dev versions for centos from the download site. To note: 1. In the 64 bit version I get

[Freesurfer] atlas and coordinate

2005-11-16 Thread Antao Du
Hi, I processed a bunch of data using the version of 2004 freesurfer. what is the atlas and the coordinate file for each locations used in mris_anatomical_stats? Thanks, Antao ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.

[Freesurfer] tkmedit

2005-11-16 Thread Sasha Wolosin
Dear all, My brains appear too bright after skull stripping, so I tried to fix this with the following command: tkmedit 2316_corffe brain -mm-main 0 255 But the --mm-main option did not have an effect unless I set the max to be lower than the actual max (which was about 170 in this case) The