Hi Nick,
I tried running the script you attached to this thread, and the error was
similar, albeit slightly different (see below). Any ideas?
Thanks,
Alex
make_average_surface --subjects 1000186 1000187 1000188 --out test_avg --echo
if ( 0 ) then
breaksw
end
while ( 0 != 0 )
goto parse_args_retu
Russ,
Hi, I'm wondering if you could provide more details on the failure that
you encountered. Did an MNI utility, such as nu_correct, fail to run and
complain about not finding MNI/Startup ? This is a typical failure if
perl cannot find the MNI perl files.
Do you get the failure even after exe
hi folks - I wanted to let you know that the tiger snapshot installer for mac doesn't properly install the perl libraries needed for some of the MNI tools. I was able to get things to work by copying the relevant files into /System/Library/Perl/5.8.6, but I assume that you want the installer to do
Aaron,
Hi, can you tell me the version of make_average_surface you are running?
Type:
make_average_surface --version
Just in case yours in out-of-date, I've attached the latest
make_average_surface script, which should not have the SUBJECTS bug that
you describe.
The file is gzipped, so do the
Hi, I’m trying to do a thickness analysis with
mris_glm, and I had a couple of questions:
1) I made an average surface using
mris_make_average_surface, but I won’t load it with tksurfer because it “could
not find anatomical header information.” Do you know how I can fix this? I
also tri
Hi all,
I am no longer able to load functional overlays in tkmedit. I am running
it on a RH7.3 machine. Back when we used to source from ~inverse I needed
to use the development version to load the overlays.
Here is what happens now:
- When I use the nmr standard version, it seems to load
On Mon, Jul 25, 2005 at 03:28:07PM -1000, Renat Yakupov wrote:
> I noticed that there are two Linux distribution of new FreeSurfer version,
> one for FC2 and one for
>
> RH9. Has anybody been able to run it on Fedora Core 1?
>
> When I try to run it, it says it needs tixwish, but tixwish needs tc
/space/orsay/2/knutsen
the auto intensity normalization works ok...but yeah i can't seem to
transfer the register.dat from one volume with same parameters as the rest
of the functionals, to the bold sub-dir and then paint my activation maps
using that register.dat without getting a segmentation
Tamara, are you still having a problem with this? If so, can you send me
your SUBJECTS_DIR?
On Fri, 22 Jul 2005, Doug Greve wrote:
For the over-saturation, you can adjust the brightness with the fmov
entry box. You can also click in the image window and hit 'i' to
toggle the automatic inte
not quite. Another couple of weeks.
Bruce
On Tue, 26 Jul 2005, David Soscia wrote:
Hey Guys,
Has the new version of FreeSurfer been released yet? I spoke with Dr.
Killiany at BU two Fridays ago and he told me it was going to be
released very soon. If so, where can I get it because I don't s
Hey Guys,
Has the new version of FreeSurfer been released yet? I spoke with Dr.
Killiany at BU two Fridays ago and he told me it was going to be
released very soon. If so, where can I get it because I don't see it
anywhere on the FreeSurfer dowload page.
Thanks,
Dave
David A. Soscia
Neurosc
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