Hi everybody, I've been having a strange problem running stage1 of
recon-all. The process finishes successfully when I select "Process
Volume"
from the GUI, but fails when I start the stage via terminal command
(using
the same brain). I would prefer using the terminal command because I've
been
told
>I was wondering if I someone could send me a snapshot or pointer to
> the freesurfer recon tools for cortical inflation that was being used
> between Sept 2003 and Mar 2004. I suspect that the version changed
> somewhere in the middle of this time period and would like to analyze my
> data us
Hello all,
I've had a problem with a few subjects. When I run Create Surface it fails
at fill white matter. In the log file, it states, could not find corpus
callosum. Then an alert states
/home dir//mri/filled/COR-001
not found ... wmfill first..
when you say ok, it says
When map_all_labels is run is it using the average7 brain to know where to
map the labels onto the surfaces? Also why are the labels (such as the
central sulcus) generated by map_all_labels and
parcellate_subject different?
-Keyma
Keyma Prince
Massachusetts Institute of Technology
Department of B
Hi Keyma,
map_all_labels is not needed since the parcellation stuff was created. It
mapped based on only spherical coords of average7, ignoring the geometry of
the surface (which the parcellation uses).
Bruce
On Wed, 24 Mar 2004, Keyma Prince wrote:
> When map_all_labels is run is it using t
