https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
Mark Johnston changed:
What|Removed |Added
Status|Open|Closed
Resolution|---
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
--- Comment #11 from commit-h...@freebsd.org ---
A commit in branch main references this bug:
URL:
https://cgit.FreeBSD.org/src/commit/?id=68d3790ba0bce162f9fcaed09cfecd9adeab3943
commit 68d3790ba0bce162f9fcaed09cfecd9adeab3943
Author:
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
--- Comment #7 from commit-h...@freebsd.org ---
A commit in branch main references this bug:
URL:
https://cgit.FreeBSD.org/src/commit/?id=71ec05a21257e159f40d54e26ad0011bb19b5134
commit 71ec05a21257e159f40d54e26ad0011bb19b5134
Author:
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
--- Comment #6 from Jason W. Bacon ---
(In reply to Mark Johnston from comment #5)
FreeBSD coral.acadix bacon ~/Prog/Src/peak-classifier 1004: !972
time sort -n -k 1 -k 2 -k 3 pc-gff-stripped.bed > /dev/null
12.467u 0.906s 0:13.38 99.8%
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
Mark Johnston changed:
What|Removed |Added
Status|New |Open
--- Comment #5 from Mark John
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
--- Comment #4 from Jason W. Bacon ---
(In reply to cyril from comment #3)
The patch about cuts the time in half for my data.
FreeBSD coral.acadix bacon ~/Prog/Src/peak-classifier 1018: time sort -n -k 1
-k 2 -k 3 pc-gff-stripped.bed > /
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
cy...@freebsdfoundation.org changed:
What|Removed |Added
CC||cy...@freebsdfoundatio
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
--- Comment #2 from Jason W. Bacon ---
Created attachment 224652
--> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=224652&action=edit
Column 2 from the original BED (TSV) file
time sort -n test.txt > /dev/null
3.004u 0.063s 0:03.06
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
Mark Johnston changed:
What|Removed |Added
CC||ma...@freebsd.org
--- Comment #1 f
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=21
Bug ID: 21
Summary: FreeBSD sort much slower than GNU or NetBSD
Product: Base System
Version: 12.2-STABLE
Hardware: Any
OS: Any
Status: New
Seve
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