Re: [O] isbn-to-bibtex (from org-ref) fails

2016-04-06 Thread Julien Cubizolles
John Kitchin writes: > thanks for the report. I think I have fixed it in a recent push. It now gets the bibtex entry right however its behaviour is strange: it asks twice for a file name to save. The first query seems ok but if you give again the bib file as argument the second time, you get a w

[O] Enginnering notation in tables exported to LaTeX

2016-04-06 Thread Daniele Nicolodi
Hello, when exporting to LaTeX, numbers expressed in engineering notation contained in tables are transformed into a quite confusing notation: 1.234e5 becomes 1.234\,(5) which is rendered by LaTeX as 1.234 (5) with the space being a very narrow one. This notation is confusing because it is usually

[O] org-link-minor-mode toggleable in ediff?

2016-04-06 Thread Samuel Wales
i'd like to make org-link-minor-mode toggleable in ediff. is this possible? i tried in the b buffer and in the control panel, and it did not take effect. thanks. -- The Kafka Pandemic: http://thekafkapandemic.blogspot.com The disease DOES progress. MANY people have died from it. And ANYBODY

Re: [O] [OT] Git plus Syncthing: breaking hard links

2016-04-06 Thread Eric Abrahamsen
Adam Porter writes: > Hi again Eric, > > On second thought, while symlinks may be worth trying, they might not work. > I've noticed similar issues using Dropbox. > > If you put the file in your git repo and the symlink in Syncthing's repo, > I'm guessing Syncthing will not follow the symlink, in

Re: [O] [OT] Git plus Syncthing: breaking hard links

2016-04-06 Thread Adam Porter
Hi again Eric, On second thought, while symlinks may be worth trying, they might not work. I've noticed similar issues using Dropbox. If you put the file in your git repo and the symlink in Syncthing's repo, I'm guessing Syncthing will not follow the symlink, in which case it wouldn't sync the c

Re: [O] [OT] Git plus Syncthing: breaking hard links

2016-04-06 Thread Adam Porter
Hi Eric, Sorry I'm late, just thought I'd share an idea: did you try symlinks? A symlink points to a path, not an inode, so it shouldn't get broken like a hard link.

[O] org-ref export to html, note field is not shown

2016-04-06 Thread Uwe Brauer
Hi I have an org file with reference controlled by org-ref. The bib entry in the corresponding bib files contains a note field. When exporting the org file to latex, everything is as expected. (I have to run bibtex anyhow). But when I export to html the note field does not appear. Is this a know

Re: [O] table.el orgmode export html or latex use table-generate-source

2016-04-06 Thread Uwe Brauer
>>> "Nicolas" == Nicolas Goaziou writes: > Hello, > Uwe Brauer writes: >> However when I try to export a org file with a table controlled by >> table.el I run into a problem. I have to convert it to a org-table and >> in this process things like splitting cells are lost.

Re: [O] ox-texinfo: empty line before "* Menu:" is missing

2016-04-06 Thread Nicolas Goaziou
Hello, Jonas Bernoulli writes: > The related `org-texinfo--build-menu' has a similar issue. Unlike > `org-texinfo-make-menu' which may end up not inserting a newline > when it should, it may end up removing a newline when it should not. > > Given this Org file: > > #+TITLE: Demo2 Manual > #

Re: [O] ox-texinfo: empty line before "* Menu:" is missing

2016-04-06 Thread Nicolas Goaziou
Hello, Jonas Bernoulli writes: > Given this Org file > > #+TITLE: Demo Manual > #+TEXINFO_DIR_CATEGORY: Emacs > #+TEXINFO_DIR_TITLE: Demo: (demo). > #+TEXINFO_DIR_DESC: Demo. > > * Missing empty line > > There is text between the heading and the menu > > ** There is text b

Re: [O] table.el orgmode export html or latex use table-generate-source

2016-04-06 Thread Nicolas Goaziou
Hello, Uwe Brauer writes: > However when I try to export a org file with a table controlled by > table.el I run into a problem. I have to convert it to a org-table and > in this process things like splitting cells are lost. Why do you have to do that? Could you show an ECM? > So could org-expo

Re: [O] babel result chain outdated/inconsistent using var

2016-04-06 Thread Nicolas Goaziou
Daniele Pizzolli writes: > Thanks Nicolas for the reply. Ok, but `org-babel-execute-buffer' > produces an inconsistent document right now. This is because you ask it to. See below. > Mmm, the same reasoning can be used for arguing about the current > behaviour: If I C-c C-c on a block, I expec

Re: [O] ox-texinfo: empty line before "* Menu:" is missing

2016-04-06 Thread Jonas Bernoulli
The related `org-texinfo--build-menu' has a similar issue. Unlike `org-texinfo-make-menu' which may end up not inserting a newline when it should, it may end up removing a newline when it should not. Given this Org file: #+TITLE: Demo2 Manual #+TEXINFO_DIR_CATEGORY: Emacs #+TEXINFO_DIR_TIT

[O] ox-texinfo: empty line before "* Menu:" is missing

2016-04-06 Thread Jonas Bernoulli
Hello Given this Org file #+TITLE: Demo Manual #+TEXINFO_DIR_CATEGORY: Emacs #+TEXINFO_DIR_TITLE: Demo: (demo). #+TEXINFO_DIR_DESC: Demo. * Missing empty line There is text between the heading and the menu ** There is text before this menu ** the empty line before Menu IS

Re: [O] [PATCH] org-attach: Use relative path for git annex

2016-04-06 Thread Erik Hetzner
Hi Nicolas, I don’t believe it was ever applied, nor was it superseded by another. This was to fix a problem with testing older versions of git-annex. I believe David remove git-annex on the buildbot, which stopped it from failing, because it was not being tested. If you need me to make any chang

[O] [PATCH] new :async feature for org-babel-clojure

2016-04-06 Thread Frederick Giasson
Hi, Here is my proposal to create a new :async feature for Org-babel-clojure. This is discussed at length in this blog post: http://fgiasson.com/blog/index.php/2016/04/05/using-clojure-in-org-mode-and-implementing-asynchronous-processing/ I added the commit of the changes, the commit for the

Re: [O] Bug: URL with spaces in is incorrectly rendered in LaTeX export [8.3.3 (8.3.3-dist @ /usr/share/emacs24/site-lisp/org-mode/)]

2016-04-06 Thread Reuben Thomas
I'm sorry, I only just understood, from looking at git, that you added the ability to use angular links inside link descriptions in response to my query. Thanks very much for this quick fix! I look forward to the next release. On 6 April 2016 at 10:43, Reuben Thomas wrote: > On 6 April 2016 at

[O] org-mime-org-buffer-htmlize can't find back-end

2016-04-06 Thread Peter Davis
I used to be able to use org-buffer-org-mime-htmlize to send my org documents as multipart/alternative html & text email. For some reason, this is stopped working, and now displays Unknown "nil" back-end: Aborting export In the *Messages* buffer, I see org-export-barf-if-invalid-backend: Unkno

Re: [O] a patch to ob-lisp.el

2016-04-06 Thread numbch...@gmail.com
Oh, right. I should attach it. ```diff >From 30eec5a63e4f720fa3880b9aef06aedd84072078 Mon Sep 17 00:00:00 2001 From: stardiviner Date: Sat, 2 Apr 2016 00:46:36 +0800 Subject: [PATCH] add SLY support in ob-lisp * ob-lisp.el (org-babel-execute:lisp): Support using SLY to evaluate lisp src block.

Re: [O] [PATCH] expose nrepl's timeout setting in ob-clojure.el

2016-04-06 Thread Frederick Giasson
Hi Nicolas! -;;; ob-clojure.el --- Babel Functions for Clojure-*- lexical-binding: t; -*- +;;; ob-clojure.el --- org-babel functions for clojure evaluation Your patch reverts a change introduced in development version. Could you rebase it on top of latest Org first? Yeah sorry, I did thi

Re: [O] Space after an inline emacs call affects output on export

2016-04-06 Thread Eric S Fraga
On Wednesday, 6 Apr 2016 at 15:21, Nicolas Goaziou wrote: > In the second case, something is preventing =xxx= from being parsed as > a verbatim object. Ah, I see. Makes perfect sense. Thanks. -- : Eric S Fraga (0xFFFCF67D), Emacs 25.0.92.1, Org release_8.3.4-705-g716e33

Re: [O] font-lock fails with \to in a macro

2016-04-06 Thread Eric S Fraga
On Wednesday, 6 Apr 2016 at 14:46, Nicolas Goaziou wrote: > FWIW, I cannot reproduce it. Ignore. Probably due to the same issue discussed elsewhere: my modification of org-emphasis-alist... thanks! -- : Eric S Fraga (0xFFFCF67D), Emacs 25.0.92.1, Org release_8.3.4-705-g716e33

Re: [O] babel result chain outdated/inconsistent using var

2016-04-06 Thread Daniele Pizzolli
On Wed, Apr 06 2016, Nicolas Goaziou wrote: > Hello, > > Daniele Pizzolli writes: > >> is possible to update the “#+RESULTS: pid” when the block “#+NAME: >> echo-pid” is evaluated in the following snippet? > > Without `org-babel-execute-buffer', I don't think so. Hello, Thanks Nicolas for the r

[O] table.el orgmode export html or latex use table-generate-source

2016-04-06 Thread Uwe Brauer
hi It is great that in orgmode I can edit tables, which are controlled by table.el, since table.el for example allows to split and joins cells, which org-table does not. However when I try to export a org file with a table controlled by table.el I run into a problem. I have to convert it to a or

Re: [O] Space after an inline emacs call affects output on export

2016-04-06 Thread Nicolas Goaziou
Eric S Fraga writes: > However, I am curious as to why the output from the inline source > evaluation is different? I.e. why =xxx= versus xxx? What is the > rationale for one versus the other? The result of the inline source evaluation is =xxx= (I'll ignore the no-op results macro around it).

Re: [O] Space after an inline emacs call affects output on export

2016-04-06 Thread Eric S Fraga
On Wednesday, 6 Apr 2016 at 14:37, Nicolas Goaziou wrote: > Wild guess. You forbade ":" after emphasis markers in > `org-emphasis-regexp-components'. Ummm, I've never touched org-emphasis-regexp-components... But I have played around with org-emphasis-alist, introducing @ as an emphasis marker (

Re: [O] [PATCH] org-attach: Use relative path for git annex

2016-04-06 Thread Nicolas Goaziou
Hello, Erik Hetzner writes: > * lisp/org-attach.el (org-attach-annex-get-maybe): Use relative path as > argument for git annex. Fixes error in test with version 3 of git > annex. It seems like I lost track on this one. Could you tell me about the status of this patch? I doesn't seem to be a

Re: [O] ob-clojure: possible to display results as soon as something is written to STDOUT?

2016-04-06 Thread Frederick Giasson
Hi, Yes, you are. There is a "go to the topic" action on the left panel. Anyway, there is not much to see, just some pointers to start a discussion. Haa great thanks, see it now :) Let me revise a few things, suggest another patch, and then will start to think about these things. Thanks,

Re: [O] ob-clojure: possible to display results as soon as something is written to STDOUT?

2016-04-06 Thread Nicolas Goaziou
Frederick Giasson writes: > Humm, from the page you provided, I don't see any threads, but just > the initial message, am I looking at the right thing? Yes, you are. There is a "go to the topic" action on the left panel. Anyway, there is not much to see, just some pointers to start a discussion.

Re: [O] How to do proper folding and semantic markup

2016-04-06 Thread Eduardo Mercovich
Hi Nick. [...] >> Excuse me if this sounds almost philosophical, but in which situation an >> indirect buffer may be better that just focusing on the same (original) >> buffer? For example, when you are toying with potentially big >> modifications and don't want to replace the original? Is it like

Re: [O] How to do proper folding and semantic markup

2016-04-06 Thread Eduardo Mercovich
Hi Adam. Porter writes: >> Excuse me if this sounds almost philosophical, but in which situation an >> indirect buffer may be better that just focusing on the same (original) >> buffer? [...] > [...] > So by jumping to an entry in an indirect buffer, I see only that entry, and > I can't modify

Re: [O] ob-clojure: possible to display results as soon as something is written to STDOUT?

2016-04-06 Thread Frederick Giasson
Hi Nicolas, However, I am not sure neither how generic such a solution could be, and what would still be required to implement in each OB plugin. My (very little) experience so far is the Python prototype that John wrote, and then my analysis of the Clojure OB plugin. As I was explaining in this

Re: [O] babel result chain outdated/inconsistent using var

2016-04-06 Thread Nicolas Goaziou
Hello, Daniele Pizzolli writes: > is possible to update the “#+RESULTS: pid” when the block “#+NAME: > echo-pid” is evaluated in the following snippet? Without `org-babel-execute-buffer', I don't think so. > This will lead to a consistent document generation with “M-x > org-babel-execute-buffe

Re: [O] a patch to ob-lisp.el

2016-04-06 Thread Nicolas Goaziou
Hello, "numbch...@gmail.com" writes: > Hi, Nicolas, the another email which you commented many places is outdated. > That patch is modified from the version of MELPA package `org-plus-conrtib`. > > I cloned org-mode git repo, and created public repo branch at here: > https://github.com/stardivin

Re: [O] font-lock fails with \to in a macro

2016-04-06 Thread Nicolas Goaziou
Hello, Eric S Fraga writes: > I have the following macro to aid in presenting calculations in > solutions to coursework questions etc. for my teaching: > > #+macro: calculate src_calc[:exports code]{$1} = @@latex:\fbox{@@ > src_emacs-lisp{(setq var-$2 (string-to-number (calc-eval "evalv($1)")))

Re: [O] ob-clojure: possible to display results as soon as something is written to STDOUT?

2016-04-06 Thread Nicolas Goaziou
Hello, Frederick Giasson writes: > However, I am not sure neither how generic such a solution could be, > and what would still be required to implement in each OB plugin. My > (very little) experience so far is the Python prototype that John > wrote, and then my analysis of the Clojure OB plugin

Re: [O] Space after an inline emacs call affects output on export

2016-04-06 Thread Nicolas Goaziou
Hello, Eric S Fraga writes: > Could anybody explain why these two lines give different outputs for the > inline elisp calculation? > > First line: > > @@latex:\fbox{@@ src_emacs-lisp{(setq var-Q1 (string-to-number (calc-eval > "evalv(15.357*(184.2-80))")))} @@latex:}@@ > > Second line: > > @@la

[O] Space after an inline emacs call affects output on export

2016-04-06 Thread Eric S Fraga
Could anybody explain why these two lines give different outputs for the inline elisp calculation? First line: @@latex:\fbox{@@ src_emacs-lisp{(setq var-Q1 (string-to-number (calc-eval "evalv(15.357*(184.2-80))")))} @@latex:}@@ Second line: @@latex:\fbox{@@ src_emacs-lisp{(setq var-Q1 (string-

Re: [O] ob-clojure: possible to display results as soon as something is written to STDOUT?

2016-04-06 Thread Frederick Giasson
Hi Nicolas, Here is a blog post that explains the changes I did. I still have one improvement to do (but don't how it could be done or even if it can be done) which is explained at the end of the post: http://fgiasson.com/blog/index.php/2016/04/05/using-clojure-in-org-mode-and-implementing-asyn

[O] babel result chain outdated/inconsistent using var

2016-04-06 Thread Daniele Pizzolli
Hello, is possible to update the “#+RESULTS: pid” when the block “#+NAME: echo-pid” is evaluated in the following snippet? This will lead to a consistent document generation with “M-x org-babel-execute-buffer” or by hitting “C-c C-c” on “#+NAME: echo-pid”. Using the cache does not make sense: th

[O] font-lock fails with \to in a macro

2016-04-06 Thread Eric S Fraga
Hello, I have the following macro to aid in presenting calculations in solutions to coursework questions etc. for my teaching: #+macro: calculate src_calc[:exports code]{$1} = @@latex:\fbox{@@ src_emacs-lisp{(setq var-$2 (string-to-number (calc-eval "evalv($1)")))} \to $2 @@latex:}\\@@ The "\t

[O] Test failures on update

2016-04-06 Thread Christian Moe
Hi, I just updated to the current 8.3.4 after a system upgrade (Mac OS X 10.11, fresh Emacs 24.5.1 installed via Homebrew). When trying to =make up2=, I got 79 "unexpected" failures. About the same as I recall from some months back, but far more than I used to. Are other people getting this many

Re: [O] a patch to ob-lisp.el

2016-04-06 Thread numbch...@gmail.com
Hi, Nicolas, the another email which you commented many places is outdated. That patch is modified from the version of MELPA package `org-plus-conrtib`. I cloned org-mode git repo, and created public repo branch at here: https://github.com/stardiviner/org-mode/tree/sly-support-for-ob-lisp I check

Re: [O] Bug: URL with spaces in is incorrectly rendered in LaTeX export [8.3.3 (8.3.3-dist @ /usr/share/emacs24/site-lisp/org-mode/)]

2016-04-06 Thread Reuben Thomas
On 6 April 2016 at 10:44, Nicolas Goaziou wrote: > Reuben Thomas writes: > > > ​So the feature is not in 8.3.4? > > No it isn't. New feature are added to development branch (master, which > will become Org 9.0 when ready), not stable branch. > ​Thanks again. -- http://rrt.sc3d.org

Re: [O] Bug: URL with spaces in is incorrectly rendered in LaTeX export [8.3.3 (8.3.3-dist @ /usr/share/emacs24/site-lisp/org-mode/)]

2016-04-06 Thread Nicolas Goaziou
Reuben Thomas writes: > ​So the feature is not in 8.3.4? No it isn't. New feature are added to development branch (master, which will become Org 9.0 when ready), not stable branch. Regards,

Re: [O] [PATCH] expose nrepl's timeout setting in ob-clojure.el

2016-04-06 Thread Nicolas Goaziou
Hello, Thank you for the patch. Frederick Giasson writes: > -;;; ob-clojure.el --- Babel Functions for Clojure-*- lexical-binding: t; > -*- > +;;; ob-clojure.el --- org-babel functions for clojure evaluation Your patch reverts a change introduced in development version. Could you rebase i

Re: [O] Bug: URL with spaces in is incorrectly rendered in LaTeX export [8.3.3 (8.3.3-dist @ /usr/share/emacs24/site-lisp/org-mode/)]

2016-04-06 Thread Reuben Thomas
On 6 April 2016 at 10:35, Nicolas Goaziou wrote: > Reuben Thomas writes: > > > When you say "latest Org", which version is that? > > The tip of master branch, a.k.a. development version. At the moment, is > it "release_8.3.4-705-g716e33". > ​So the feature is not in 8.3.4? thanks again, Reube

Re: [O] Bug: URL with spaces in is incorrectly rendered in LaTeX export [8.3.3 (8.3.3-dist @ /usr/share/emacs24/site-lisp/org-mode/)]

2016-04-06 Thread Nicolas Goaziou
Reuben Thomas writes: > When you say "latest Org", which version is that? The tip of master branch, a.k.a. development version. At the moment, is it "release_8.3.4-705-g716e33". Regards,

Re: [O] ob-lisp.el patch to choose to use SLIME or SLY

2016-04-06 Thread Nicolas Goaziou
Hello, "numbch...@gmail.com" writes: > I original created an package ob-lisp on here: > https://github.com/stardiviner/ob-lisp > and add it to MELPA recipe. > https://github.com/melpa/melpa/pull/3682 > > The author suggest me to merge this change to Org-mode. > > I attached patch in attachment f

Re: [O] Bug: URL with spaces in is incorrectly rendered in LaTeX export [8.3.3 (8.3.3-dist @ /usr/share/emacs24/site-lisp/org-mode/)]

2016-04-06 Thread Reuben Thomas
On 6 April 2016 at 10:13, Nicolas Goaziou wrote: > Hello, > > Reuben Thomas writes: > > > \href{Starting\%20Workshop\%20Notes.org}{\url{Starting Workshop > Notes.org}} > > > > But maybe the space ends the URL? > > Indeed. For obvious reasons, "plain links" do not accept spaces since > those are

Re: [O] a patch to ob-lisp.el

2016-04-06 Thread Nicolas Goaziou
Hello, "numbch...@gmail.com" writes: > Ask a beside question. I cloned org-mode git repo, should I contribute my > patch with git way? (I mean create a git branch on my own public clone, > then paste it here to let maintainer merge it?) Please look at the document suggested by Thomas. In partic

Re: [O] a patch to ob-lisp.el

2016-04-06 Thread Nicolas Goaziou
Hello, "numbch...@gmail.com" writes: > My think my patch modifies less than 15 lines. Do I have to assign the > copyright of FSF? No you don't. That will be helpful for your next patches. > I have sent one. But no response for some days. I hope Org-mode maintainer > can merge this patch. The

Re: [O] Bug: URL with spaces in is incorrectly rendered in LaTeX export [8.3.3 (8.3.3-dist @ /usr/share/emacs24/site-lisp/org-mode/)]

2016-04-06 Thread Nicolas Goaziou
Hello, Reuben Thomas writes: > \href{Starting\%20Workshop\%20Notes.org}{\url{Starting Workshop Notes.org}} > > But maybe the space ends the URL? Indeed. For obvious reasons, "plain links" do not accept spaces since those are used as a delimiter. However, angular links could be used in this case

Re: [O] Bug: URL with spaces in is incorrectly rendered in LaTeX export [8.3.3 (8.3.3-dist @ /usr/share/emacs24/site-lisp/org-mode/)]

2016-04-06 Thread Reuben Thomas
On 5 April 2016 at 23:01, Nicolas Goaziou wrote: > Hello, > > Reuben Thomas writes: > > > The output for > > > > [[file:Starting%20Workshop%20Notes.org][file:Starting Workshop > Notes.org]] > > > > is: > > > > > ​​ > \href{Starting\%20Workshop\%20Notes.org}{\url{Starting} Workshop Notes.org} >

Re: [O] agenda column view and CLOCKSUM

2016-04-06 Thread Nicolas Goaziou
Hello, Makmiller Pedroso writes: > I am using Org-mode version 8.3beta (release_8.3beta-422-gb54ad3). > > I tried to create a minimal example in which the CLOCKSUMs do not get > updated. It seems that the CLOCKSUM_T is the one that is not getting > updated (unless if I run the column view in the

Re: [O] logging the timings of task A + task B both at once?

2016-04-06 Thread Nicolas Goaziou
Hello, Sharon Kimble writes: > Being that we can have multiple cursors, is it possible to have 2 > separate, distinct, tasks being clocked both at the same time? [...] > So, can it be done please? There can only be one active clock at any given time. Although I understand the need for some s

[O] logging the timings of task A + task B both at once?

2016-04-06 Thread Sharon Kimble
Being that we can have multiple cursors, is it possible to have 2 separate, distinct, tasks being clocked both at the same time? I've googled but didn't come up with anything, but trying it I find that 'Task B' when it starts timing it auto-logs-out of 'Task A'. But I'm now in the situation where

Re: [O] ob-clojure: possible to display results as soon as something is written to STDOUT?

2016-04-06 Thread Nicolas Goaziou
Hello, Frederick Giasson writes: > Here is a blog post that explains the changes I did. I still have one > improvement to do (but don't how it could be done or even if it can be > done) which is explained at the end of the post: > > http://fgiasson.com/blog/index.php/2016/04/05/using-clojure-in-

Re: [O] Bug: CALL misbehavior with :results verbatim [8.3.4 (8.3.4-5-gdc68d2-elpaplus @ /Users/rossdonaldson/.emacs.d/elpa/org-plus-contrib-20160229/)]

2016-04-06 Thread Nicolas Goaziou
Hello, Ross Donaldson writes: > So: by default (at least, for me, in my configuration), Org > automatically tries to interpret the results of src blocks as Org > values -- usually tables. For example, evaluating `ls -la` in a shell > src block returns, by default, Org's best attempt to parse a t