Re: Please test the Apache cTAKES 5.1.0 release candidate

2024-04-29 Thread gandhi rajan
Thanks for the insights Peter. I dint make it clear that I did ran the install on ytex module with test case execution toggled off. I used the following command - "mvn -e clean install -Dmaven.test.skip=true" and I still hit the same error. On digging deep, I could find that the build process is t

Re: Please test the Apache cTAKES 5.1.0 release candidate [EXTERNAL]

2024-04-29 Thread Finan, Sean
Hi Peter, Thank you for testing! I will see if I can get the mastif-zoner in the distribution and push a 5.1.1 candidate. From: Peter Abramowitsch Sent: Saturday, April 27, 2024 1:48 AM To: dev@ctakes.apache.org Subject: Re: Please test the Apache cTAKES 5.1.0

Re: Please test the Apache cTAKES 5.1.0 release candidate [EXTERNAL]

2024-04-29 Thread Finan, Sean
Hi Gandhi, Thank you for testing. I have not seen this error but will try to see if I can reproduce it or otherwise diagnose it. Before I build the release candidate I make sure that my build area, maven cache, temp directories, etc. are empty, but maybe I still have something left from a pre

Re: Please test the Apache cTAKES 5.1.0 release candidate

2024-04-29 Thread Peter Abramowitsch
Hi Gandhi This project is an odd one in the sense that when you tell it to skip the tests, it still goes through the effort in building up the db environment that the tests would use. But in any case, for me it does build either way. In the attached log, I've run a maven clean before doing the bu

Re: Please test the Apache cTAKES 5.1.0 release candidate

2024-04-29 Thread Peter Abramowitsch
I think this is the class where Java is exiting with 1 /ctakes-ytex/src/test/java/org/apache/ctakes/jdl/AppMainTest.java btw my environment is MacOS and I notice yours is Windows, so the root cause why this class is giving you trouble is something I wouldn't be able to help you with. But some deb

Re: Please test the Apache cTAKES 5.1.0 release candidate [EXTERNAL]

2024-04-29 Thread Finan, Sean
Hi Gandhi, Peter, I am on Windows and the tests work fine. They must all run for the release phases. Peter, I found the problem. In the candidate the -distribution bin definition was missing mastif-zoner. I added it and all looks good except that the xml files aren't there. I am putting t

Re: Please test the Apache cTAKES 5.1.0 release candidate

2024-04-29 Thread Jeffery Painter
Also, depending on your setup, newer versions of MySQL will break with current code until my PRs are incorporated :-) https://github.com/apache/ctakes/pull/10 https://github.com/apache/ctakes/pull/13 https://github.com/apache/ctakes/pull/14 https://github.com/apache/ctakes/pull/16 #10 adds supp

Re: Please test the Apache cTAKES 5.1.0 release candidate

2024-04-29 Thread gandhi rajan
HI Peter, Thanks for the insights. I tried to debug from AppMain.java and it eventually fails in "org.apache.ctakes.jdl.data.xml.jaxb.ObjectFactoryBind.(ObjectFactoryBind.java:43)" Attaching the complete stacktrace for reference: [INFO] [java] invoking method [INFO] [java] Exception i

Re: Please test the Apache cTAKES 5.1.0 release candidate

2024-04-29 Thread Peter Abramowitsch
Hi Gandhi, I think the email from Jeff Painter may explain your situation. It's a question of your version of mysql being new. The crucial lines in your trace are: org.apache.ctakes.jdl.AppMain.main(AppMain.java:84) [INFO] [java] Caused by: java.lang.reflect.InaccessibleObjectException: U