Hi all
I've started using the mitre ZoneAnnotator am making some optimizations and
necessary changes which prevent it from leaking note text into the log file
(horrors!!!)
But I have a question. Turns out that back in 2012 someone left raw
system.outs in the mastif-zoner code which comes to cT
Hi Peter,
The fastest turnaround for you would probably be seen by modifying a local
copy. According to this site the source is available:
http://mastif.sourceforge.net/
Sean
From: Peter Abramowitsch
Sent: Thursday, February 10, 2022 2:12 PM
To: dev@ct
Thanks for the BERT negation classifier Tim - I tested it on a small sample of
radiology notes and didn't see a big improvement in accuracy (kudos to the
original ctakes pipeline!) but your framework of a FastAPI component that can
loosely interface with cTAKES was really interesting.
@Peter -
-- Forwarded message -
From: Peter Abramowitsch
Date: Thu, Feb 10, 2022 at 6:41 PM
Subject: Re: neural negation model in ctakes
To:
Hi Tom
My changes to negex are checked into the ctakes trunk in sub-project
ctakes-ytex-uima
Make sure you also pick up the updated resources: a
