Re: consequences of change to typesystem [EXTERNAL]

2018-03-28 Thread Finan, Sean
Hi Sean, In case nobody else has replied, Yes, this would definitely break a whole lot of things. I am not saying that it is a bad idea, just that the current BinaryTextRelation interface is used as-is in probably a thousand places, and while some refactoring might be trivial I wouldn't bet th

RE: Query on LabValueFinder

2018-03-28 Thread Gandhi Rajan Natarajan
Hi Sean, Can you throw some light on this? Regards, Gandhi -Original Message- From: Kean Kaufmann [mailto:k...@recordsone.com] Sent: Monday, March 19, 2018 8:35 PM To: dev@ctakes.apache.org Subject: Re: Query on LabValueFinder Gandhi, at first blush, I can't replicate your result using

Re: Query on LabValueFinder [EXTERNAL]

2018-03-28 Thread Finan, Sean
Hi Gandhi, I know that I just sent an email to the devlist, but that seemed like an item that had wide-impact. Because of some critical work (job that pays the bills) I am still "dark" as far as ctakes goes - no free nights and only partial weekends. My apologies. I know that there are a lot

RE: Query on LabValueFinder [EXTERNAL] [SUSPICIOUS]

2018-03-28 Thread Finan, Sean
Guilt is such a powerful motivator ... The problem is that ctakes traditionally identifies a bunch of those terms as Medications, not Labs. So, I added a parameter named "useDrugs" to the LabValueFinder. If you set that to "true" then the Lab/Medication values come through shining. I also ad

RE: Query on LabValueFinder [EXTERNAL] [SUSPICIOUS]

2018-03-28 Thread Gandhi Rajan Natarajan
Hi Sean, This is phenomenal commitment. I appreciate your dedication and passion. You are such an inspiration to the open source contributors. Thanks for taking time out amidst busy schedule and having a look at this. Will check this change and keep you posted. Regards, Gandhi -Original

Re: How to change and build project source code?

2018-03-28 Thread Reed Villanueva
Finally found the problem. I was initially only using the user binaries, which I installed using the user installation guide (https://cwiki.apache.org/conf luence/display/CTAKES/cTAKES+4.0+User+Install+Guide) (which instructs setting the environment variable *CTAKES_HOME=*, maybe you see where thi

RE: consequences of change to typesystem [EXTERNAL]

2018-03-28 Thread Mullane, Sean *HS
Sean, Glad I asked. I will try either what you suggested or the similar approach of adding some code to handle the bare-annotation-as-feature case similarly to how annotations inside FSArrays are handled. Thanks, Sean -Original Message- From: Finan, Sean [mailto:sean.fi...@childrens.ha

RE: How to change and build project source code?

2018-03-28 Thread Gandhi Rajan Natarajan
Hi Reed, In this case, I feel 'CTAKES_HOME' environment variable is not required at all. Because runPiperCreator.bat considers current directory as 'CTAKES_HOME' if not defined. That's why it worked fine for me when I tried as I don’t have 'CTAKES_HOME' environment variable set. I'm not sure w